Weekly research seminar
Organizers
- prof. dr hab. Anna Gambin
- dr Aleksander Jankowski
- dr hab. Bartosz Wilczyński
Information
Wednesdays, 10:15 a.m. , room: 5820Home page
http://bioputer.mimuw.edu.pl/seminars/bob/Research fields
List of talks
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Nov. 15, 2023, 4 p.m.
Alexander Misharin (Northwestern University, Chicago)
Macrophage stories: How aging and inflammation shape alveolar macrophage function
Alveolar macrophages are key players in lung health and disease and also accurate sensors of lung environment. In this talk, Dr. Alexander Misharin will demonstrate how high-content technologies, including bulk and single-cell RNA-seq, applied to …
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Nov. 8, 2023, 10:15 a.m.
Maria Bochenek (MIM UW)
Deciphering enhancer regulatory code for medical genetics
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Oct. 11, 2023, 10:15 a.m.
Bartek Wilczyński (MIM UW)
Overview of deep learning approaches to non-coding regulatory DNA
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June 14, 2023, 10:15 a.m.
Bartosz Ambroży Greń (CeNT UW)
Handcuffs and lassos in proteins in ideal polymers
In general proteins are open chains, but some of them have some kind of extra closure (e.g. cysteine bridge, isopeptide bond, metal ion bridge) which alters their topology. Because of these closures we can find …
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June 7, 2023, 10:15 a.m.
Mohammad Saqib (Faculty of Chemistry, UW)
ML for Protein Secondary Structure Assignments
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May 31, 2023, 10:15 a.m.
Torgeir R. Hvidsten (Norwegian University of Life Sciences)
A comparative regulomics method for studying gene regulatory evolution
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May 24, 2023, 10:15 a.m.
Barbara Domżał (MIM UW)
Magnetstein: universal tool for complex mixture analysis in NMR spectroscopy
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May 17, 2023, 10:15 a.m.
Konrad Łukaszyk (CeNT UW)
Deciphering single cells niche composition and their effect on hair follicle and dermal papillae Stem Cells regulation during the hair regeneration cycle
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May 10, 2023, 10:15 a.m.
Marcin Wierzbiński (MIM UW)
HP) protein folding model with the Monte Carlo Method and A* algorith
The modeling of protein folding, a biological issue, is particularly intriguing. The deterministic solution of the so-called hydrophobic-polar (HP) protein folding model is one such problem. It turns out that the Monte Carlo methods used …
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April 26, 2023, 10:15 a.m.
Kazimierz Oksza-Orzechowski (MIM UW)
CaClust: mapping cells to the clonal structure in Follicular Lymphoma
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April 19, 2023, 10:15 a.m.
Senbai Kang (MIM UW)
DelSIEVE: joint inference of single-nucleotide variants, deletions, and cell phylogeny from single-cell DNA sequencing data
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April 12, 2023, 10:15 a.m.
Jan Poleszczuk (Institute of Biocybernetics and Biomedical Engineering PAS and Maria Sklodowska-Curie National Research Institute of Oncology)
AI/ML in Polish healthcare system: current opportunities and challenges