Publications

Przemysław Biecek

Number of publications: 173

2025

• Maciej Chrabąszcz, Hubert Baniecki, Piotr Komorowski, Szymon Płotka, Przemysław Biecek , Aggregated Attributions for Explanatory Analysis of 3D Segmentation Models, 2025 IEEE/CVF Winter Conference on Applications of Computer Vision, Tucson, Arizona, the United States of America, 28 February 2025 - 4 March 2025. See in PBN
• Hubert Baniecki, Przemysław Biecek , Birds look like cars: adversarial analysis of intrinsically interpretable deep learning, Machine Learning, 114 (12) 2025. See in PBN
• Paulina Tomaszewska, Elżbieta Sienkiewicz, Przemysław Biecek , Mai P. Hoang, Deep Spatial Context: When Attention-Based Models Meet Spatial Regression (Digital Pathology), 23rd International Conference on Artificial Intelligence in Medicine, Pavia, Italy, 22 June 2025 - 25 June 2025. See in PBN
• Hubert Baniecki, Giuseppe Casalicchio, Bernd Bischl, Przemysław Biecek , Efficient and Accurate Explanation Estimation with Distribution Compression, The Thirteenth International Conference on Learning Representations, Singapore, Singapore, 24 April 2025 - 28 April 2025. See in PBN
• Bastian Pfeifer, Mateusz Krzyziński, Hubert Baniecki, Andreas Holzinger, Przemysław Biecek , Explaining and visualizing black-box models through counterfactual paths, Pattern Analysis and Applications, 28 (3) 2025. See in PBN
• Nicholas Spyrison, Dianne Cook, Przemysław Biecek , Exploring local explanations of nonlinear models using animated linear projections, Computational Statistics, 40 (2) 2025, p. 1071-1095. See in PBN
• Ewa Mazurkiewicz-Stanek, Joanna Machnik, Iryna Kopernyk, Wojciech Wiertelak, Dorota Maszczak-Seneczko, Estera Jeruzalska, Agnieszka Biernatowska, Aleksandra Makowiecka, Michał Majkowski, Przemysław Biecek , Tomasz Trombik, Piotr Donizy, Antonina J. Mazur, Gelsolin traps ribosomal protein SA (RPSA) within lipid nanodomains of the plasma membrane and modulates the level of protein synthesis in the submembranous region of human skin melanoma cells, Biochimica et Biophysica Acta - Molecular Basis of Disease, 1871 (3) 2025, p. 1-21. See in PBN
• Przemysław Biecek , Barłomiej Sobieski, Global Counterfactual Directions, The 18th European Conference on Computer Vision, Milano, Italy, 28 September 2024 - 3 October 2024. See in PBN
• Hubert Baniecki, Bartłomiej Sobieski, Patryk Szatkowski, Przemysław Bombiński, Przemysław Biecek , Interpretable machine learning for time-to-event prediction in medicine and healthcare, Artificial Intelligence in Medicine, 159 2025, p. 103026. See in PBN
• Vladimir Zaigrajew, Hubert Baniecki, Przemysław Biecek , Interpreting CLIP with Hierarchical Sparse Autoencoders, The 42nd International Conference on Machine Learning, Vancouver, Canada, 13 July 2025 - 19 July 2025, 267 2025, p. 73918-73956. See in PBN
• Mustafa Cavus, Przemysław Biecek , Investigating the impact of balancing, filtering, and complexity on predictive multiplicity: A data-centric perspective, Information Fusion, 123 2025, p. 103243. See in PBN
• Bartłomiej Sobieski, Jakub Grzywaczewski, Bartłomiej Sadlej, Matthew Tivnan, Przemysław Biecek , Rethinking Visual Counterfactual Explanations Through Region Constraint, The Thirteenth International Conference on Learning Representations, Singapur, Singapore, 23 April 2025 - 27 April 2025. See in PBN

2024

• Krzysztof Bartnik, Mateusz Krzyziński, Tomasz Bartczak, Krzysztof Korzeniowski, Krzysztof Lamparski, Tadeusz Wróblewski, Michał Grąt, Wacław Hołówko, Katarzyna Mech, Joanna Lisowska, Magdalena Januszewicz, Przemysław Biecek , A novel radiomics approach for predicting TACE outcomes in hepatocellular carcinoma patients using deep learning for multi-organ segmentation, Scientific Reports, 14 (1) 2024, p. 1-13. See in PBN
• Przemysław Biecek , Hubert Baniecki, Adversarial attacks and defenses in explainable artificial intelligence: A survey, Information Fusion, 107 2024, p. 1-14. See in PBN
• Przemysław Biecek , Alistair Knott, Dino Pedreschi, Toshiya Jitsuzumi, Susan Leavy, David Eyers, Tapabrata Chakraborti, Andrew Trotman, Sundar Sundareswaran, Ricardo Baeza-Yates, Adrian Weller, Paul D. Teal, Subhadip Basu, Mehmet Haklidir, Virginia Morini, Stuart Russell, Yoshua Bengio, AI content detection in the emerging information ecosystem: new obligations for media and tech companies, Ethics and Information Technology, 26 (4) 2024, p. 1-14. See in PBN
• Krzysztof Kotlarz, Magda Mielczarek, Przemysław Biecek , Katarzyna Wojdak-Maksymiec, Tomasz Suchocki, Piotr Topolski, Wojciech Jagusiak, Joanna Szyda, An Explainable Deep Learning Classifier of Bovine Mastitis Based on Whole-Genome Sequence Data—Circumventing the p >> n Problem, International Journal of Molecular Sciences, 25 (9) 2024. See in PBN
• Przemysław Biecek , Nuno Henriques dos Santos de Sepulveda, André Fonseca, Mikołaj Spytek, Clara Cordeiro, Antibody selection strategies and their impact in predicting clinical malaria based on multi-sera data, BioData Mining, 17 2024, p. 1-23. See in PBN
• Sławomir Nowaczyk, Przemysław Biecek , Neo Christopher Chung , Mauro VALLATI, Paweł Skruch, Joanna Jaworek-Korjakowska, Simon PARKINSON, Alexandros NIKITAS, Tomáš Kliegr, Martin Atzmüller, Eunika Mercier-Laurent, Roland van Dierendonck, Saskia Robben, Mieczyslaw Lech Owoc, Giorgio Terracina, Jochen L. Leidner, Vania Dimitrova, Diedrich Wolter, Francesco Cauteruccio, Bruno Pierangela, Karl Mason, Gülgün Kayakutlu, Nada Lavrac, Szymon Bobek, Marieke Peeters, Ute Schmid, Francesco Calimeri, Michael Kohlhase, Abdul Wahid, Artificial Intelligence : ECAI 2023 International Workshops : XAI^3, TACTIFUL, XI-ML, SEDAMI, RAAIT, AI4S, HYDRA, AI4AI : Kraków, Poland, September 30-October 4, 2023 : proceedings, part II, 26th European Conference on Artificial Intelligence, Kraków, Poland, 29 September 2023 - 3 October 2023, 2 2024. See in PBN
• Przemysław Biecek , Julian Sienkiewicz, Stanisław Giziński, Paulina Kaczyńska, Hubert Ruczyński, Emilia Wiśnios, Bartosz Pieliński, Big Tech influence over AI research revisited: Memetic analysis of attribution of ideas to affiliation, Journal of Informetrics, (18) 2024, p. 1-17. See in PBN
• Katarzyna Woźnica, Przemysław Biecek , Mateusz Grzyb, Zuzanna Trafas, Consolidated learning: a domain-specific model-free optimization strategy with validation on metaMIMIC benchmarks, Machine Learning, 113 (7) 2024, p. 4925-4949. See in PBN
• Katarzyna Kobylinska, Mateusz Krzyziński, Rafal Machowicz, Mariusz Adamek, Przemysław Biecek , Exploration of the Rashomon Set Assists Trustworthy Explanations for Medical Data, IEEE Journal of Biomedical and Health Informatics, 28 (11) 2024, p. 6454-6465. See in PBN
• Krzysztof Kotlarz, Magda Mielczarek, Przemysław Biecek , Bernt Guldbrandtsen, Joanna Szyda, Exploring the impact of sequence context on errors in SNP genotype calling with whole genome sequencing data using AI-based autoencoder approach, NAR Genomics and Bioinformatics, 6 (3) 2024. See in PBN
• Przemysław Biecek , Piotr Donizy, Mikołaj Spytek, Mateusz Krzyziński, Krzysztof Kotowski, Anna Markiewicz, Bozena Romanowska-Dixon, Mai P Hoang, Ki67 is a better marker than PRAME in risk stratification of BAP1-positive and BAP1-loss uveal melanomas, British Journal of Ophthalmology, 108 (7) 2024, p. 1005-1010. See in PBN
• Przemysław Biecek , Weronika Hryniewska-Guzik, Adrianna Grudzień, LIMEcraft: handcrafted superpixel selection and inspection for Visual eXplanations, Machine Learning, 113 (5) 2024, p. 3143-3160. See in PBN
• Hubert Baniecki, Giuseppe Casalicchio, Bernd Bischl, Przemysław Biecek , On the Robustness of Global Feature Effect Explanations, Machine Learning and Knowledge Discovery in Databases. Research Track and Demo Track ECML PKDD 2024, Vilnius, Lithuania, 9 September 2024 - 13 September 2024. See in PBN
• Przemysław Biecek , Hubert Baniecki, Mateusz Krzyziński, Dianne Cook, Performance Is Not Enough: The Story Told by a Rashomon Quartet, Journal of Computational and Graphical Statistics, 33 (3) 2024, p. 1118-1121. See in PBN
• Paulina Tomaszewska, Przemysław Biecek , Position: Do Not Explain Vision Models Without Context, 41st International Conference on Machine Learning, Vienna, Austria, 21 July 2024 - 27 July 2024. See in PBN
• Przemysław Biecek , Wojciech Samek, Position: Explain to Question not to Justify, 41st International Conference on Machine Learning, Wiedeń, Austria, 20 July 2024 - 26 July 2024. See in PBN
• Katarzyna Woźnica, Przemysław Biecek , Katarzyna Krzanowska, Krzysztof Batko, Karolina Niezabitowska, Tomasz Grodzicki, Maciej Małecki, Monika Bociąga-Jasik, Marek Rajzer, Krzysztof Sładek, Barbara Wizner, Marcin Krzanowski, Predicting acute kidney injury onset using a random forest algorithm using electronic medical records of COVID-19 patients: the CRACoV-AKI model, Polskie Archiwum Medycyny Wewnetrznej, 134 (5) 2024, p. 1-9. See in PBN
• Janusz Hołyst, Mayr Philipp, Thelwall Michael, Frommholz Ingo, Havlin Shlomo, Sela Alon, Kenett Yoed, Helic Denis, Rehar Aljoša, Macek Sebastijan, Przemysław Kazienko, Kajdanowicz Tomasz, Przemysław Biecek , Boleslaw Szymański, Julian Sienkiewicz, Protect our environment from information overload, Nature Human Behaviour, 8 (3) 2024, p. 402-403. See in PBN
• Przemysław Biecek , Krzysztof Jankowski, Bartlomiej Sobieski, Mateusz Kwiatkowski, Jakub Szulc, Michał Janik, Hubert Baniecki, Red-Teaming Segment Anything Model, IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, Seattle, Washington, the United States of America, 16 June 2024 - 17 June 2024. See in PBN
• Wiktoria Mieleszczenko-Kowszewicz, Przemysław Biecek , Piotr Wilczyński, Resistance Against Manipulative AI: Key Factors and Possible Actions, 27th European Conference on Artificial Intelligence, Santiago de Compostella, Spain, 18 October 2024 - 23 October 2024. See in PBN
• Anna Szumera-Cieckiewicz, Daniela Massi, Angelo Cassisa, Mateusz Krzyziński, Monika Dudzisz-Sledz, Przemysław Biecek , Piotr Rutkowski, Andrzej Marszalek, Mai P. Hoang, Piotr Donizy, SATB2, CKAE1/AE3, and synaptophysin as a sensitive immunohistochemical panel for the detection of lymph node metastases of Merkel cell carcinoma, Virchows Archiv, 484 (4) 2024, p. 629-636. See in PBN
• Przemysław Biecek , Maciej Chrabąszcz, Szymon Płotka, Swin SMT: Global Sequential Modeling for Enhancing 3D Medical Image Segmentation, 27th International Conference on Medical Image Computing and Computer Assisted Intervention, Marrakesh, Morocco, 5 October 2024 - 9 October 2024. See in PBN
• Dariusz Parzych, Przemysław Biecek , Hubert Baniecki, The grammar of interactive explanatory model analysis, Data Mining and Knowledge Discovery, 38 (5) 2024, p. 2596-2632. See in PBN

2023

• Anna Michalska-Falkowska, Jacek Niklinski, Hartmut Juhl, Anetta Sulewska, Joanna Kisluk, Radoslaw Charkiewicz, Michal Ciborowski, Rodryg Ramlau, Robert Gryczka, Cezary Piwkowski, Mirosław Kozłowski, Borys Miśkiewicz, Przemysław Biecek , Karolina Wnorowska, Zofia Dzieciol-Anikiej, Karine Sargsyan, Wojciech Naumnik, Robert Mroz, Joanna Reszec-Gielazyn, Applied Molecular-Based Quality Control of Biobanked Samples for Multi-Omics Approach, Cancers, 15 (14) 2023, p. 1-16. See in PBN
• Tiago Dias Domingues, João Malato, Anna D. Grabowska, Ji-Sook Lee, Jose Ameijeiras-Alonso, Przemysław Biecek , Luís Graça, Helena Mouriño, Carmen Scheibenbogen, Francisco Westermeier, Luis Nacul, Jacqueline M. Cliff, Eliana Lacerda, Nuno Henriques dos Santos de Sepulveda, Association analysis between symptomology and herpesvirus IgG antibody concentrations in myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) and multiple sclerosis, Heliyon, 9 (7) 2023, p. 1-16. See in PBN
• Paulina Tomaszewska, Przemysław Biecek , Maciej Tyszko, Anna Lemańska-Perek, Jakub Śmiechowicz, Waldemar Gozdzik, Barbara Adamik, Citrulline, Intestinal Fatty Acid-Binding Protein and the Acute Gastrointestinal Injury Score as Predictors of Gastrointestinal Failure in Patients with Sepsis and Septic Shock, Nutrients, 15 (9) 2023, p. 1-14. See in PBN
• Przemysław Biecek , Hubert Baniecki, Wojciech Kretowicz, Fooling Partial Dependence via Data Poisoning, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Grenoble, France, 18 September 2022 - 22 September 2022. See in PBN
• Przemysław Biecek , Alistair Knott, Dino Pedreschi, Raja Chatila, Tapabrata Chakraborti, Susan Leavy, Ricardo Baeza-Yates, Eyers David, Andrew Trotman, Paul D. Teal, Stuart Russell, Yoshua Bengio, Generative AI models should include detection mechanisms as a condition for public release, Ethics and Information Technology, 25 (4) 2023, p. 1-7. See in PBN
• Hubert Baniecki, Bartłomiej Sobieski, Przemysław Bombiński, Patryk Szatkowski, Przemysław Biecek , Hospital Length of Stay Prediction Based on Multi-modal Data Towards Trustworthy Human-AI Collaboration in Radiomics, 21st International Conference on Artificial Intelligence in Medicine, Portorož, Slovenia, 12 June 2023 - 15 June 2023. See in PBN
• Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemysław Biecek , Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana, Konstantinos Sechidis, Arif Canakoglu, Sara Pido, Pietro Pinoli, Albert Bifet, Sepideh Pashami, Zbigniew Raś, Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2022, Grenoble, France, September 19–23, 2022, Proceedings, Part I, European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases, Grenoble, France, 19 September 2022 - 23 March 2023. See in PBN
• Margarita Dobrzycka, Anetta Sulewska, Przemysław Biecek , Radoslaw Charkiewicz, Piotr Karabowicz, Angelika Charkiewicz, Kinga Golaszewska, Patrycja Milewska, Anna Michalska-Falkowska, Karolina Nowak, Jacek Niklinski, Joanna Konopińska, miRNA Studies in Glaucoma: A Comprehensive Review of Current Knowledge and Future Perspectives, International Journal of Molecular Sciences, 24 (19) 2023, p. 1-25. See in PBN
• Radoslaw Charkiewicz, Anetta Sulewska, Alicja Charkiewicz, Attila Gyenesei, Bence Galik, Rodryg Ramlau, Cezary Piwkowski, R. Stec, Przemysław Biecek , Piotr Karabowicz, Anna Michalska-Falkowska, Wojciech Miltyk, Jacek Niklinski, miRNA-Seq Tissue Diagnostic Signature: A Novel Model for NSCLC Subtyping, International Journal of Molecular Sciences, 24 (17) 2023, p. 1-16. See in PBN
• Miriam Hippner-Kunicka, Agnieszka Laszkiewicz, Joanna Skrzymowska, Przemysław Biecek , Piotr Donizy, Arkadiusz Miazek, Overexpression of c-MYC Promoter Binding Protein-1 Enhances Proliferation and Glucose Metabolism of Melanoma Cells Lines, ANTICANCER RESEARCH, 43 (6) 2023, p. 2527-2583. See in PBN
• Przemysław Biecek , Katharine Sherratt, Hugo Gruson, Rok Grah, Helen Johnson, Rene Niehus, Bastian Prasse, Frank Sandmann, Jannik Deuschel, Daniel Wolffram, Sam Abbott, Alexander Ullrich, G. Gibson, Evan L Ray, Nicholas G Reich, Daniel Sheldon, Nutcha Wattanachit, Lijing Wang, Jan Trnka, Guillaume Obozinski, Tao Sun, Dorina Thanou, Loic Pottier, Ekaterina Krymova, Jan H Meinke, Maria Vittoria Barbarossa, Neele Leithauser, Jan Mohring, Johanna Schneider, Jaroslaw Wlazlo, Jan Fuhrmann, Berit Lange, Isti Rodiah, Prasith Baccam, Heidi Gurung, Steven Stage, Bradley Suchoski, Jozef Budzinski, Robert Walraven, Inmaculada Villanueva, Vit Tucek, Martin Smid, Milan Zajicek, Cesar Perez Alvarez, Borja Reina, Nikos I Bosse, Sophie R Meakin, Lauren Castro, Geoffrey Fairchild, Isaac Michaud, Dave Osthus, Pierfrancesco Alaimo Di Loro, M. Antonello, Veronika Eclerova, Andrea Kraus, David Kraus, Lenka Pribylova, Bertsimas Dimitris, Soni Saksham, Jonas Dehning, Sebastian Mohr, Viola Priesemann, Grzegorz Redlarski, Benjamin Bejar, Giovanni Ardenghi, Nicola Parolini, Giovanni Ziarelli, Wolfgang Bock, Stefan Heyder, Thomas Hotz, David E Singh, Miguel Guzman-Merino, Jose L Aznarte, M. David, Sergio Alonso, Enric Alvarez, Daniel Lopez, Clara Prats, Jan Pablo Burgard, Arne Rodloff, Tom Zimmermann, Alexander Kuhlmann, Janez Zibert, Fulvia Pennoni, Fabio Divino, Marti Catala, Gianfranco Lovison, Paolo Giudici, Barbara Tarantino, Francesco Bartolucci, Giovanna Jona Lasinio, Marco Mingione, Alessio Farcomeni, Ajitesh Srivastava, Pablo Montero-Manso, Aniruddha Adiga, Benjamin Hurt, Bryan Lewis, Madhav Marathe, Przemyslaw Porebski, Srinivasan Venkatramanan, Rafal P Bartczuk, Filip Dreger, Anna Gambin, Krzysztof Gogolewski, Magdalena Gruziel-Slomka, Bartosz Krupa, Antoni Moszyński, Karol Niedzielewski, Jedrzej Nowosielski, Maciej Radwan, Franciszek Rakowski, Marcin Semeniuk, Ewa Szczurek, Barbara Pabjan, Kirsten Holger, Yuri Kheifetz, M. Scholz, Marcin Bodych, Maciej Filinski, Radoslaw Idzikowski, Tyll Krueger, Tomasz Ozanski, Johannes Bracher, Sebastian Funk, Predictive performance of multi-model ensemble forecasts of COVID-19 across European nations, eLife, 4 2023, p. 1-19. See in PBN
• Jacek Sokołowski, Adam Orłowski, Robert Bartoszewicz, Magdalena Lachowska, Alicja Gosiewska, Przemysław Biecek , Kazimierz Niemczyk, Quantitative analysis of 3D-printed custom ossicular prostheses motion using laser Doppler vibrometry, Otolaryngologia Polska, 77 (6) 2023, p. 23-30. See in PBN
• Joanna Drozd-Sokołowska, Krzysztof Mądry, Joanna Barankiewicz, Katarzyna Kobylińska, Przemysław Biecek , Jagoda Rytel, Ewa Karakulska-Prystupiuk, Kamila Skwierawska, Aleksander Salomon-Perzyński, Tomasz Stokłosa, Grzegorz Władysław Basak, SARS-CoV-2 Infection in Patients Treated with Azacitidine and Venetoclax for Acute Leukemia: A Report of a Case Series Treated in a Single Institution, Chemotherapy, 68 (1) 2023, p. 16-22. See in PBN
• Przemysław Biecek , Mikołaj Spytek, Mateusz Krzyziński, Sophie Hanna Langbein, Hubert Baniecki, Marvin N Wright, survex: an R package for explaining machine learning survival models, Bioinformatics, 39 (12) 2023, p. 1-4. See in PBN
• Przemysław Biecek , Mateusz Krzyziński, Mikołaj Spytek, Hubert Baniecki, SurvSHAP(t): Time-dependent explanations of machine learning survival models, Knowledge-Based Systems, 262 2023, p. 1-13. See in PBN
• Adrian Stańdo, Mustafa Cavus, Przemysław Biecek , The Effect of Balancing Methods on Model Behavior in Imbalanced Classification Problems, Proceedings of Machine Learning Research, 241 2023, p. 16-30. See in PBN
• Piotr Komorowski, Hubert Baniecki, Przemysław Biecek , Towards Evaluating Explanations of Vision Transformers for Medical Imaging, IEEE/CVF Conference on Computer Vision and Pattern Recognition 2023 Workshops, Vancouver, Canada, 18 June 2023 - 22 June 2023. See in PBN

2022

• Przemysław Biecek , Angela Lombardi, Domenico Diacono, Nicola Amoroso, Alfonso Monaco, Loredana Bellantuono, Ester Pantaleo, Giancarlo Logroscino, Roberto De Blasi, Sabina Tangaro, Roberto Bellotti, A robust framework to investigate the reliability and stability of explainable artificial intelligence markers of Mild Cognitive Impairment and Alzheimer’s Disease, Brain Informatics, 9 (1) 2022, p. 1-17. See in PBN
• Miriam Hippner, Michal Majkowski, Przemysław Biecek , Teresa Szkudlarek, Aleksandra Simiczyjew, Malgorzata Pieniazek, Dorota Nowak, Arkadiusz Miazek, Piotr Donizy, Alpha-Enolase (ENO1) Correlates with Invasiveness of Cutaneous Melanoma—An In Vitro and a Clinical Study, Diagnostics, 12 (2) 2022. See in PBN
• Elżbieta Sienkiewicz, Przemysław Biecek , Joanna Drozd-Sokołowska, Anna Waszczuk-Gajda, Magdalena Witkowska, Anna Kopińska, Agnieszka Kołkowska-Leśniak, Joanna Barankiewicz, Monika Długosz-Danecka, Piotr Smolewski, Grzegorz Helbig, Ewa Lech-Marańda, Wojciech Jurczak, Sebastian Giebel, Wiesław Wiktor-Jędrzejczak, Grzegorz Basak, Bing-Neel Syndrome, a Rare Presentation of Waldenström Macroglobulinemia—A Multicenter Report by the Polish Lymphoma Research Group, Journal of Clinical Medicine, 11 (15) 2022, p. 1-12. See in PBN
• Przemysław Biecek , Mustafa Cavus, Explainable expected goal models for performance analysis in football analytics, 9th IEEE International Conference on Data Science and Advanced Analytics (DSAA), Shenzhen, China, 12 October 2022 - 15 October 2022. See in PBN
• Przemysław Biecek , Katarzyna Kobylińska, Tadeusz Orłowski, Mariusz Adamek, Explainable Machine Learning for Lung Cancer Screening Models, Applied Sciences (Switzerland), 12 (4) 2022, p. 1-14. See in PBN
• Przemysław Biecek , Jakub Wiśniewski, fairmodels: a Flexible Tool for Bias Detection, Visualization, and Mitigation in Binary Classification Models, R Journal, 14 (1) 2022, p. 227-243. See in PBN
• Katarzyna Woźnica, Przemysław Biecek , Alicja Gosiewska, Interpretable meta-score for model performance, Nature Machine Intelligence, 4 (9) 2022, p. 792-800. See in PBN
• Hubert Baniecki, Przemysław Biecek , Manipulating SHAP via Adversarial Data Perturbations (Student Abstract), AAAI Conference on Artificial Intelligence, online, ZZ, 22 February 2022 - 1 March 2022, 36 (11) 2022, p. 12907-12908. See in PBN
• Przemysław Biecek , Bastian Pfeifer, Hubert Baniecki, Anna Saranti, Andreas Holzinger, Multi-omics disease module detection with an explainable Greedy Decision Forest, Scientific Reports, 12 2022, p. 1-15. See in PBN
• Nuno Henriques dos Santos de Sepulveda, João Malato, Franziska Sotzny, Anna D. Grabowska, André Fonseca, Clara Cordeiro, Luís Graça, Przemysław Biecek , Uta Behrends, Josef Mautner, Francisco Westermeier, Eliana M. Lacerda, Carmen Scheibenbogen, Revisiting IgG Antibody Reactivity to Epstein-Barr Virus in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome and Its Potential Application to Disease Diagnosis, Frontiers in Medicine, 9 2022, p. 1-13. See in PBN
• Wojciech Jaworski, Przemysław Biecek , Adam Dobrakowski, Małgorzata Marciniak, Agnieszka Mykowiecka, Agnieszka Morusiewicz, Joanna Przetacka, Łukasz Kamiński, Supporting Doctor’s Decisions Based on Electronic Medical Documentation in Polish, 18th World Congress of Medical and Health Informatics, Virtual Event, Germany, 2 October 2021 - 4 October 2021. See in PBN
• Wioletta Nowaczewska, Anna Maria Kubicka, Janusz Piontek, Przemysław Biecek , The meaning of the shape of the frontal bone, facial retraction and prognathism for the degree of gracilisation of the supraorbital region in Homo sapiens, Anthropologischer Anzeiger, 79 (3) 2022, p. 341-360. See in PBN
• Przemysław Biecek , Michael Bücker, Gero Szepannek, Alicja Gosiewska, Transparency, auditability, and explainability of machine learning models in credit scoring, Journal of the Operational Research Society, 73 (1) 2022, p. 70-90. See in PBN

2021

• Johannes Bracher, Daniel Wolffram, Jannik Deuschel, Konstantin Görgen, Jakob Ketterer, Alexander Ullrich, Sam Abbott, Maria Vittoria Barbarossa, Dimitris Bertsimas, Sangeeta Bhatia, MARCIN BODYCH, Nikos I. Bosse, Jan Pablo Burgard, Lauren Castro, Geoffrey Fairchild, Jan Fuhrmann, Sebastian Funk, Krzysztof Gogolewski , Quanquan Gu, Stefan Heyder, Thomas Hotz, Yuri Kheifetz, Holger Kirsten, Ekaterina Krymova, Michael Lingzhi Li, Jan H. Meinke, Isaac J. Michaud, Karol Niedzielewski, Tomasz Ożański, Franciszek Rakowski, Markus Scholz, Saksham Soni, Ajitesh Srivastava, Jakub Zieliński, Difan Zou, Tilmann Gneiting, Melanie Schienle, Hamza Tazi Bouardi, Omar Skali Lami, Łukasz Górski , Magdalena Gruziel-Słomka, Artur Kaczorek, Antoni Moszyński, Jedrzej Nowosielski, Maciej Radwan, Marcin Semeniuk, Rafał Bartczuk, Jan Kisielewski, Przemysław Biecek , VIKTOR BEZBORODOV, Dave A. Osthus, Anna Gambin , Błażej Miasojedow , Ewa Szczurek , Daniel Rabczenko, Magdalena Rosińska, Barbara Pabjan, EWARYST RAFAJŁOWICZ, EWA SKUBALSKA-RAFAJŁOWICZ, WOJCIECH RAFAJŁOWICZ, Agata Migalska, Antoine Flahault, Elisa Manetti, Christine Choirat, Benjamín Béjar Haro, Gavin Lee, Guillaume Obozinski, Tao Sun, Dorina Thanou, Pan Xu, Jinghui Chen, Lingxiao Wang, Weitong Zhang, Viktor K. Prasanna, Frost Tianjian Xu, MAREK BAWIEC, TYLL KRÜGER, A pre-registered short-term forecasting study of COVID-19 in Germany and Poland during the second wave, Nature Communications, vol. 12 (art. 5173) 2021, p. 1-16. See in PBN
• Przemysław Biecek , Hubert Baniecki, Wojciech Kretowicz, Piotr Piatyszek, Jakub Wiśniewski, dalex: Responsible Machine Learning with Interactive Explainability and Fairness in Python, Journal of Machine Learning Research, 22 2021, p. 1-7. See in PBN
• Przemysław Biecek , Tomasz Burzykowski, Explanatory Model Analysis - Explore, Explain, and Examine Predictive Models, 2021. See in PBN
• Adam Gabriel Dobrakowski, Agnieszka Mykowiecka, Małgorzata Marciniak, Wojciech Jaworski, Przemysław Biecek , Interpretable segmentation of medical free-text records based on word embeddings, Journal of Intelligent Information Systems, 57 (3) 2021, p. 447-465. See in PBN
• Tomasz Stanisławek, Filip Graliński, Anna Wróblewska, Dawid Lipiński, Agnieszka Kaliska, Bartosz Topolski, Przemysław Biecek , Paulina Rosalska, Kleister: Key Information Extraction Datasets Involving Long Documents with Complex Layouts, 16th International Conference on Document Analysis and Recognition, Lausanne, Switzerland, 4 September 2021 - 9 September 2021. See in PBN
• Jakob M.T. Moran, Piotr Donizy, Cheng-Lin Wu, Janusz Kopczynski, Malgorzata Pieniazek, Janusz Ryś, Mai P. Hoang, Przemysław Biecek , Large nuclear size correlated with better overall survival, Merkel cell polyomavirus positivity, and terminal deoxynucleotidyl transferase expression in Merkel cell carcinoma, Journal of the American Academy of Dermatology, 84 (2) 2021, p. 550-552. See in PBN
• Piotr Donizy, Joanna P. Wróblewska, Dora Dias-Santagata, Katarzyna Woznica, Przemysław Biecek , Mark C. Mochel, Cheng-Lin Wu, Janusz Kopczynski, Malgorzata Pieniazek, Janusz Ryś, Andrzej Marszalek, Mai P. Hoang, Merkel cell carcinoma of unknown primary: immunohistochemical and molecular analyses reveal distinct UV-signature/MCPyV-negative and high immunogenicity/MCPyV-positive profiles., Cancers, 13 (8) 2021, p. art. 1621 s. 1-14. See in PBN
• ANNA MARKIEWICZ, Piotr Donizy, MARTYNA ELAS, JOLANTA ORŁOWSKA-HEITZMANN, BOŻENA ROMANOWSKA-DIXON, Przemysław Biecek , Nuclear pseudoinclusions and intranuclear grooves have an important impact on the long-term survival of patients with uveal melanoma, ANTICANCER RESEARCH, 41 (1) 2021, p. 517-526. See in PBN
• Piotr Kupczyk, Aleksandra Simiczyjew, Jakub Marczuk, Ewelina Dratkiewicz, Artur Beberok, Jakub Rok, Malgorzata Pieniazek, Dmitry Nevozhay, Bartosz Slowikowski, Dorota Wrzesniok, Dorota Nowak, Piotr Donizy, Przemysław Biecek , Grzegorz Chodaczek, PARP1 as a marker of an aggressive clinical phenotype in cutaneous melanoma - a clinical and an in vitro study., Cells, 10 (2) 2021, p. art. 286 s. 1-21. See in PBN

2020

• TOMASZ BERUS, ANNA MARKIEWICZ, JOLANTA ORŁOWSKA-HEITZMAN, Agnieszka Hałoń, BOŻENA ROMANOWSKA-DIXON, Piotr Donizy, Przemysław Biecek , Clinical significance of nucleoli cytomorphology assessment in patients with uveal melanoma, ANTICANCER RESEARCH, 40 (6) 2020, p. 3505-3512. See in PBN
• Tomasz Berus, Anna Markiewicz, Katarzyna Kobylinska, Jolanta Orlowska-Heitzman, Bozena Romanowska-Dixon, Piotr Donizy, Przemysław Biecek , Downregulation of Polo-like kinase-1 (PLK-1) expression is associated with poor clinical outcome in uveal melanoma patient, Folia Histochemica et Cytobiologica, 58 (2) 2020, p. 108-116. See in PBN
• Karol Lis, Monika Gasik, Karolina Chromik, Grzegorz Basak, Bartosz Garus, Katarzyna Romanowska-Prochnicka, Adam Hajduk, Monika Ewa Swacha, Katarzyna Kurowska, Mateusz Staniak, Jadwiga Dwilewicz-Trojaczek, Malgorzata Paszkowska-Kowalewska, Magdalena Witkowska, Joanna Drozd-Sokołowska, Agnieszka Piekarska, Krzysztof Mądry, Renata Guzicka-Kazimierczak, Łukasz Bołkun, Mateusz Ziarkiewicz, Piotr Boguradzki, Piotr Smolewski, Wanda Knopińska-Posłuszny, Alina Świderska, Agnieszka Konska, Anna Waszczuk-Gajda, Aleksandra Bogucka-Fedorczuk, Rafał Machowicz, Przemysław Biecek , Dominik Bursa, Emilian Snarski, Bożena Budziszewska, Agnieszka Szymczyk, Marta Marszałek-Grabska, Patrycja Mensah-Glanowska, Wojciech Sydor, Katarzyna Popko, Wiesław Jędrzejczak, Edyta Cichocka, Michał Górka, Małgorzta Raźny, Katarzyna Brzeźniakiewicz-Janus, Dorota Zduńczyk, Justyna Gil, Slawomir Rejowski, Patrycja Zielinska, Katarzyna Kobylińska, EFFECTIVENESS OF ETOPOSIDE THERAPY IN ADULT HLH - ANALYSIS FROM THE PALG HLH IN ADULTS DATABASE, PEDIATRIC BLOOD & CANCER, Abstracts from the 35th Annual Meeting of the Histiocyte Society, Memphis, TN, the United States of America, 2 November 2019 - 4 November 2019, 67 (suppl. 1) 2020, p. 18-19. See in PBN
• Rudradev Sengupta, Nolen Joy Perualila, Ziv Shkedy, Przemysław Biecek , Geert Molenberghs, Luc Bijnens, High dimensional surrogacy: computational aspects of an upscaled analysis, Journal of Biopharmaceutical Statistics, 30 (1) 2020, p. 104-120. See in PBN
• Adam Gabriel Dobrakowski, Agnieszka Mykowiecka, Małgorzata Marciniak, Wojciech Jaworski, Przemysław Biecek , Interpretable Segmentation of Medical Free-Text Records Based on Word Embeddings, 25th International Symposium on Methodologies for Intelligent Systems, Gratz, Austria, 22 September 2020 - 24 September 2020. See in PBN
• Przemysław Biecek , Rafał Cylwa, Kornel Kiełczewski, Marta Machnik, Urszula Oleksiewicz, KRAB ZNF explorer-the online tool for the exploration of the transcriptomic profiles of KRAB-ZNF factors in The Cancer Genome Atlas., Bioinformatics, 36 (3) 2020, p. 980-981. See in PBN
• Anna Waszczuk-Gajda, Jolanta Małyszko, David H. Vesole, Magdalena Feliksbrot-Bratosiewicz, Kamila Skwierawska, Katarzyna Krzanowska, Katarzyna Kobylińska, Przemysław Biecek , Emilian Snarski, Anna Rodziewicz-Lurzyńska, Paweł Kozłowski, Agnieszka Stefaniak, Joanna Drozd-Sokołowska, Mateusz Ziarkiewicz, Pyush Vyas, Piotr Boguradzki, Krzysztof Mądry, Jarosław Biliński, Agnieszka Tomaszewska, Martyna Maciejewska, Elżbieta Urbanowska, Beata Blajer, M. Król, Hanna Zborowska, Artur Jurczyszyn, Jadwiga Dwilewicz-Trojaczek, Wieslaw W. Jedrzejczak, Grzegorz W. Basak, Negative Impact of Borderline Creatinine Concentration and Glomerular Filtration Rate at Baseline on the Outcome of Patients With Multiple Myeloma Treated With Autologous Stem Cell Transplant, Transplantation Proceedings, 52 (7) 2020, p. 2186-2192. See in PBN
• Maciej Kaczorowski, Przemysław Biecek , Piotr Donizy, Małgorzata Pieniążek, Rafał Matkowski, Agnieszka Hałoń, ROCK1 and ROCK2 are down-regulated in aggressive and advanced skin melanomas - A clinicopathological perspective, ANTICANCER RESEARCH, 40 (4) 2020, p. 1931-1942. See in PBN
• Joanna Drozd-Sokołowska, JM. Zaucha, Przemysław Biecek , A. Giza, K. Kobylinska, M. Joks, Tomasz Wróbel, B. Kumiega, W. Knopinska-Posluszny, W. Spychalowicz, Joanna Romejko-Jarosińska, J. Fischer, W. Wiktor-Jedrzejczak, Monika Długosz-Danecka, Sebastian Giebel, Wojciech Jurczak, Type 2 diabetes mellitus compromises the survival of diffuse large B-cell lymphoma patients treated with (R)-CHOP - the PLRG report, Scientific Reports, 10 (1) 2020, p. 1-9. See in PBN

2019

• Alicja Gosiewska, Przemysław Biecek , auditor: an R Package for Model-Agnostic Visual Validation and Diagnostics, R Journal, 11 (2) 2019, p. 85. See in PBN
• Przemysław Biecek , Marta Klimczak, Alicja Żylicz, Maciej Żylicz, Heat shock proteins create a signature to predict the clinical outcome in breast cancer., Scientific Reports, 9 (1) 2019, p. 7507:1-15. See in PBN
• Piotr Rudzki, Przemysław Biecek , Michał Kaza, Incurred Sample Reanalysis: Time to Change the Sample Size Calculation?, AAPS Journal, 21 (2) 2019, p. 1-8. See in PBN
• Maciej Kaczorowski, Przemysław Biecek , Piotr Donizy, Malgorzata Pieniazek, Rafał Matkowski, Agnieszka Hałoń, Low RhoA expression is associated with adverse outcome in melanoma patients: a clinicopathological analysis, American Journal of Translational Research, 11 (7) 2019, p. s.4524-4532. See in PBN
• Barbara Rychalska, Dominika Basaj, Alicja Gosiewska, Przemysław Biecek , Models in the Wild: On Corruption Robustness of Neural NLP Systems, Lecture Notes in Computer Science, 26th International Conference on Neural Information Processing, Sydney, Australia, 12 December 2019 - 15 December 2019. See in PBN
• Tomasz Stanislawek, Anna Wróblewska, Alicja Wójcicka, Daniel Ziembicki, Przemysław Biecek , Named Entity Recognition - Is there a glass ceiling?, The 23rd Conference on Computational Natural Language Learning (CoNLL 2019), Hong Kong, China, 3 November 2019 - 4 November 2019. See in PBN
• Jerzy Kowalczyk, Roman Jaksik, Monika Kraszewska-Hamilton, Tomasz Szczepański, Katarzyna Zdon, Obul R Bandapalli, Andreas E Kulozik, Pieter Van Vlierberghe, Joachim B Kunz, Łukasz Sędek, Monika Drobna-Śledzińska, Maria Kosmalska, Bronisława Szarzyńska-Zawadzka, Michał Witt, Małgorzata Dawidowska, Przemysław Biecek , PTEN abnormalities predict poor outcome in children with T-cell acute lymphoblastic leukemia treated according to ALL IC-BFM protocols, American Journal of Hematology, 94 (4) 2019, p. E93-E96. See in PBN
• Maciej Kaczorowski, Przemysław Biecek , Piotr Donizy, Małgorzata Pieniążek, Rafał Matkowski, Agnieszka Hałoń, SMAD7 is a novel independent predictor of survival in patients with cutaneous melanoma, Translational Research, 204 2019, p. 72-81. See in PBN
• Przemysław Biecek , Marta Machnik, Andrzej Mackiewicz, Urszula Oleksiewicz, The expression signature of cancer-associated KRAB-ZNF factors identified in TCGA pan-cancer transcriptomic data., Molecular Oncology, 13 (4) 2019, p. 701-724. See in PBN
• Rafał Matkowski, Bartłomiej Szynglarewicz, Przemysław Biecek , Tomasz Michalik, The use of ultrasonic scalpel lowers the risk of post-mastectomy seroma formation in obese women, Journal of Cancer, 10 (15) 2019, p. 3481-3485. See in PBN
• Aleksandra Żbikowska, Małgorzata Kotwicka, Tomasz Kotwicki, Piotr Janusz, Piotr Harasymczuk, Mirosław Andrusiewicz, Przemysław Biecek , TIMP2 polymorphisms association with curve initiation and progression of thoracic idiopathic scoliosis in the Caucasian females., JOURNAL OF ORTHOPAEDIC RESEARCH, 37 (10) 2019, p. 2217-2225. See in PBN
• Rafał Matkowski, Bartłomiej Szynglarewicz, Józef Forgacz, Przemysław Biecek , Tomasz Michalik, Ultralow anterior resection with implantation of gentamicin-collagen sponge and no defunctioning stoma: anastomotic leakage and local cancer relapse, Radiology and Oncology, 53 (1) 2019, p. 77-84. See in PBN

2018

• Paweł Szwedyk, Magdalena Raźny, Agata Obara, Magdalena Dutka, Krzysztof Lewandowski, Grażyna Bober, Katarzyna Kapelko-Słowik, Agnieszka Piekarska, Beata Stella-Hołowiecka, Helena Krzemień, Małgorzata Paszkowska-Kowalewska, Waldemar Sawicki, Jadwiga Dwilewicz-Trojaczek, Krzysztof Mądry, Rafał Machowicz, Joanna Drozd-Sokołowska, Anna Waszczuk-Gajda, Przemysław Biecek , Bożena Budziszewska, Ewa Wasilewska, Atypical chronic myeloid leukaemia: A case of an orphan disease-A multicenter report by the Polish Adult Leukemia Group, Hematological Oncology, 36 (3) 2018, p. 570-575. See in PBN
• Rafał Matkowski, Piotr Donizy, Bartłomiej Szynglarewicz, Agnieszka Hałoń, Przemysław Biecek , Piotr Kasprzak, Biological Aggressiveness of Subclinical No-Mass Ductal Carcinoma In Situ (DCIS) Can Be Reflected by the Expression Profiles of EpithelialMesenchymal Transition Triggers, International Journal of Molecular Sciences, 19 (12/3941) 2018, p. 1-14. See in PBN
• Przemysław Biecek , DALEX: Explainers for Complex Predictive Models in R, Journal of Machine Learning Research, 19 2018, p. 1-5. See in PBN
• Przemysław Biecek , Mateusz Staniak, Explanations of model predictions with live and breakDown packages, R Journal, 10 (2) 2018, p. 395-409. See in PBN
• Przemysław Biecek , Extended 3D and 4D cumulative plots for evaluation of unmatched incurred sample reanalysis, Bioanalysis, 10 (3) 2018, p. 1-10. See in PBN
• Joanna Peradzyńska, Wiesław Jędrzejczak, Anna Waszczuk-Gajda, Magdalena Feliksbrot-Bratosiewicz, Jadwiga Dwilewicz-Trojaczek, M. Król, Magdalena Król, Joanna Drozd-Sokołowska, Zbigniew Lewandowski, Emilian Snarski, Przemysław Biecek , Influence of Clonal Plasma Cell Contamination of Peripheral Blood Stem Cell Autografts on Progression and Survival in Multiple Myeloma Patients After Autologous Peripheral Blood Stem Cell Transplantation in Long-term Observation, Transplantation Proceedings, 50 (7) 2018, p. 2202-2211. See in PBN
• Rafał Matkowski, Piotr Donizy, Agnieszka Hałoń, Maciej Kaczorowski, Przemysław Biecek , Nuclear pseudoinclusions in melanoma cells: prognostic fact or artifact? The possible role of Golgi phosphoprotein 3 overexpression in nuclear pseudoinclusions generation, Pathology International, 68 (2) 2018, p. 117-122. See in PBN
• Przemysław Biecek , Alicja Gosiewska, Aleksandra Grudziąż, survxai: an R package for structure-agnostic explanations of survival models, The Journal of Open Source Software, 3 (31) 2018, p. 1-5. See in PBN

2017

• Rafał Archacki, Ruslan Yatusevich, Daniel Buszewicz, Katarzyna Krzyczmonik, Jacek Patryn, Roksana Iwanicka-Nowicka, Przemysław Biecek , Bartosz Wilczyński , Marta Koblowska, Andrzej Jerzmanowski, Szymon Świeżewski, Arabidopsis SWI/SNF chromatin remodeling complex binds both promoters and terminators to regulate gene expression., Nucleic Acids Research, 45 (6) 2017, p. 3116–3129. See in PBN
• Przemysław Biecek , Marcin Kosiński, archivist: An R Package for Managing, Recording and Restoring Data Analysis Results, Journal of Statistical Software, 82 (11) 2017, p. 1-28. See in PBN
• Przemysław Biecek , Piotr Rudzki, Michał Kaza, Comprehensive graphical presentation of data from incurred sample reanalysis, Bioanalysis, 9 (12) 2017, p. 1-9. See in PBN
• Maciej Beręsewicz, Adolfo Alvarez Pinto, Przemysław Biecek , Marcin Krzysztof Dyderski, Marcin Piotr Kosiński, Jakub Nowosad, Kamil Rotter, Alicja Szabelska-Beręsewicz, Marcin Szymkowiak, Łukasz Wawrowski, Joanna Zyprych-Walczak, Conference Report: European R Users Meeting 2016, R Journal, 9 (1) 2017, p. 501-504. See in PBN
• Bartłomiej Szynglarewicz, Piotr Kasprzak, Piotr Donizy, Przemysław Biecek , Agnieszka Hałoń, Rafał Matkowski, Epithelial-mesenchymal transition inducer Snail1 and invasive potential of intraductal breast cancer, Journal of Surgical Oncology, 116 (6) 2017, p. 696-705. See in PBN
• Ilona Kondratiuk, Szymon Łęski, Fred Van Leuven, Benoit Lechat, Herman Devijver, Przemysław Biecek , Tomasz Jaworski, LESZEK KACZMAREK, Małgorzata Urbańska, GSK-3β and MMP-9 Cooperate in the Control of Dendritic Spine Morphology, Molecular Neurobiology, 54 (1) 2017, p. 200-211. See in PBN
• Daniel H. Caro, Przemysław Biecek , Intsvy: An R Package for Analyzing International Large-Scale Assessment Data, Journal of Statistical Software, 81 (7) 2017, p. 1-44. See in PBN
• Zuzanna Tracz-Gaszewska, Marta Klimczak, Przemysław Biecek , Marcin Herok, Marcin Kosiński, MACIEJ OLSZEWSKI, Patrycja Czerwińska, Milena Wiech, Maciej Wiznerowicz, Bartosz Wawrzynów, Alicja Żylicz, Maciej Żylicz, Molecular chaperones in the acquisition of cancer cell chemoresistance with mutated TP53 and MDM2 up-regulation., Oncotarget, 8 (47) 2017, p. 82123-82143. See in PBN
• Rafał Matkowski, Piotr Donizy, Agnieszka Hałoń, Adam Maciejczyk, Przemysław Biecek , Nucleoli cytomorphology in cutaneous melanoma cells – a new prognostic approach to an old concept, Diagnostic Pathology, 12 (88) 2017, p. 1-9. See in PBN
• Leo Lahti, Janne Huovari, Markus Kainu, Przemysław Biecek , Retrieval and Analysis of Eurostat Open Data with the eurostat Package, R Journal, 9 (1) 2017, p. 385-392. See in PBN
• Wioletta Nowaczewska, Urszula Łapicka, Agata Cieślik, Przemysław Biecek , The relationship of cranial, orbital and nasal cavity size with the morphology of the supraorbital region in modern Homo sapiens, Anthropologischer Anzeiger, 74 (3) 2017, p. 241-246. See in PBN
• Marta Gładych, Ayush T Raman, Holger Heyn, Elisabetta Mereu, Paula Chlebanowska, Anastazja Andrzejewska, Barbara Sożańśka, Neha Samant, Katarzyna Fąk, Paulina Auguścik, Marcin Kosiński, Joanna P Wróblewska, Katarzyna Tomczak, Rafał Płoski, Przemysław Biecek , Manel Esteller, Parantu K Shah, Kunal Rai, Maciej Wiznerowicz, Katarzyna Kulcenty, Urszula Oleksiewicz, TRIM28 and Interacting KRAB-ZNFs Control Self-Renewal of Human Pluripotent Stem Cells through Epigenetic Repression of Pro-differentiation Genes, Stem Cell Reviews and Reports, 9 (6) 2017, p. 2065-2080. See in PBN
• Barbara Sozańska, Przemysław Biecek , Marta Klimczak, Patrycja Czerwińska, Sylwia Mazurek, Andrzej Mackiewicz, Maciej Wiznerowicz, TRIM28 epigenetic corepressor is indispensable for stable induced pluripotent stem cell formation., Stem Cell Research, 23 2017, p. 163-172. See in PBN
• Jannik Andersen, Przemysław Biecek , Patrycja Czerwińska, Violetta Filas, Marta Klimczak, Konstanty Korski, Andrzej Mackiewicz, Sylwia Mazurek, Parantu Shah, Barbara Sozańska, Katarzyna Tomczak, Maciej Wiznerowicz, TRIM28 multi-domain protein regulates cancer stem cell population in breast tumor development., Oncotarget, 8 (1) 2017, p. 863-882. See in PBN

2016

• Przemysław Biecek , Francesca Borgonovi, An international comparison of students' ability to endure fatigue and maintain motivation during a low-stakes test, Learning and Individual Differences, 2016. See in PBN
• Przemysław Biecek , BILL CD8 – A Multivariable Survival Model as a Simple and Clinically Useful Prognostic Tool to Identify High-risk Cutaneous Melanoma Patients, ANTICANCER RESEARCH, 36 (9) 2016, p. 4739-4747. See in PBN
• Piotr Donizy, Agnieszka Hałoń, Przemysław Biecek , Rafał Matkowski, BILLCD8 - a multivariable survival model as a simple and clinically useful prognostic tool to identify high-risk cutaneous melanoma patients, ANTICANCER RESEARCH, 36 (9) 2016, p. 4739-4747. See in PBN
• Rafał Matkowski, Przemysław Biecek , Piotr Donizy, Agnieszka Hałoń, Maciej Kaczorowski, Adam Maciejczyk, Contrary effect of two types of spatial distribution (diffuse versus marginal) of CD8-positive lymphocytes on clinical outcome in melanoma patients, International Journal of Clinical and Experimental Pathology, 9 (8) 2016, p. 8415-8423. See in PBN
• Przemysław Biecek , Ewelina Dobrzyńska, Andrzej Kiejna, Joanna Rymaszewska, Do mental health outpatient services meet users' needs? Trial to identify factors associated with higher needs for care, Community Mental Health Journal, 2016. See in PBN
• Przemysław Biecek , Piotr Donizy, Agnieszka Hałoń, Piotr Kasprzak, Rafał Matkowski, Bartłomiej Szynglarewicz, Ductal carcinoma in situ on stereotactic biopsy of suspicious breast microcalcifications: expression of SPARC (Secreted Protein, Acidic and Rich in Cysteine) can predict postoperative invasion, Journal of Surgical Oncology, 2016. See in PBN
• Piotr Donizy, Maciej Kaczorowski, Rafał Matkowski, Teresa Szkudlarek, Agnieszka Hałoń, Przemysław Biecek , Golgi-related proteins GOLPH2 (GP73/GOLM1) and GOLPH3 (GOPP1/MIDAS) in cutaneous melanoma: patterns of expression and prognostic significance, International Journal of Molecular Sciences, 2016. See in PBN
• Grzegorz Basak, Przemysław Biecek , Joanna Drozd-Sokołowska, Wiesław Jędrzejczak, Kazimierz Niemczyk, Jacek Sokołowski, Rhinosinusitis in Acute Leukemia Patients Undergoing Allogeneic Stem Cell Transplantation—A Single-Center Experience, Transplantation Proceedings, 12th Congress of the Polish Transplantation Society, 2016. See in PBN
• Przemysław Biecek , Agnieszka Hałoń, Piotr Kasprzak, Rafał Matkowski, Bartłomiej Szynglarewicz, Screen-detected ductal carcinoma in situ found on stereotactic vacuum-assisted biopsy of suspicious microcalcifications without mass: radiological-histological correlation, Radiology and Oncology, 2016. See in PBN

2015

• Przemysław Biecek , M Glowala, M Kosior, G Nowicka, A Sawicka, M Sokal, M Talalaj, M Wlodarczyk, M Wrzosek, Impact of obesity and nitric oxide synthase gene G894T polymorphism on essential hypertension, Journal of Physiology and Pharmacology, 66 (5) 2015, p. 681-689. See in PBN
• Przemysław Biecek , Łukasz Kuźmiński, Wioletta Nowaczewska, Morphological Relationship Between the Cranial and Supraorbital Regions in Homo sapiens, American Journal of Physical Anthropology, 2015. See in PBN
• Elżbieta Bartnikowska, Przemysław Biecek , Grzegorz Gielerak, Paweł Krzesiński, Ewelina Pałkowska-Goździk, Katarzyna Piotrowicz, Andrzej Skrobowski, Adam Stańczyk, Self-reported health-related behaviors and dietary habits in patients with metabolic syndrome, Cardiology Journal, 2015. See in PBN

2014

• Mirosław Banasik, Przemysław Biecek , Maria Boratyńska, Paweł Chudoba, Dorota Kamińska, Marian Klinger, K[atarzyna] Kościelska-Kasprzak, Magdalena Krajewska, Katarzyna Madziarska, Oktawia Mazanowska, Sławomir Zmonarski, M[arcelina] Żabińska, Advanced age of renal transplant recipients correlates with increased plasma concentrations of interleukin-6, chemokine ligand 2 (CCL2), and matrix metalloproteinase 2, and urine concentrations of CCL2 and tissue inhibitor of metalloproteinase 1, Transplantation Proceedings, 2014. See in PBN
• Przemysław Biecek , Jan Fronk, Emilia Jarochowska, Maciej Jończyk, Jorg Leipner, Alicja Sobkowiak, Paweł Sowiński, Joanna Trzcińska-Danielewicz, Genome-wide transcriptomic analysis of response to low temperature reveals candidate genes determining divergent cold-sensitivity of maize inbred lines., Plant Molecular Biology, 85 2014, p. 317-331. See in PBN
• Mirosław Banasik, Przemysław Biecek , Maria Boratyńska, Paweł Chudoba, Dorota Kamińska, Marian Klinger, K[atarzyna] Kościelska-Kasprzak, Magdalena Krajewska, Katarzyna Madziarska, Oktawia Mazanowska, Sławomir Zmonarski, M[arcelina] Żabińska, Increased plasma matrix metalloproteinase-2 (MMP-2), tissue inhibitor of proteinase-1 (TIMP-1), TIMP-2, and urine MMP-2 concentrations correlate with proteinuria in renal transplant recipients, Transplantation Proceedings, 11th Congress of the Polish-Transplantation-Society, Bydgoszcz, Poland, 28 November 2013 - 30 November 2013. See in PBN
• Hanna Baurska, Przemysław Biecek , Olga Haus, Bożena Jaźwiec, Marek Kiełbiński, Andrzej Kutner, Ewa Marcinkowska, Monocytic differentiation induced by side-chain modified analogs of vitamin D in ex vivo cells from patients with acute myeloid leukemia, Leukemia Research, 2014. See in PBN

2013

• Magdalena Krajewska, Mirosław Banasik, Dariusz Patrzałek, Paweł Chudoba, Marian Klinger, Marcelina Żabińska, Katarzyna Kościelska-Kasprzak, Oktawia Mazanowska, Maria Boratyńska, Dorota Kamińska, Przemysław Biecek , Increased plasma tissue inhibitors of metalloproteinase concentrations as negative predictors associated with deterioration of kidney allograft function upon long-term observation, Transplantation Proceedings, 2013. See in PBN
• Przemysław Biecek , Agnieszka Ochocka, Mirosław Ślusarczyk, Prevalence of kairomone-induced diapause in Daphnia magma from habitats with and without fish, Hydrobiologia, 2013. See in PBN

2012

• Matkowski Rafał, Wojciech Kielan, Piotr Donizy, Agnieszka Halon, Julia Rudno-Rudzińska, Przemysław Biecek , HER-2 Expression in Immunohistochemistry Has No Prognostic Significance in Gastric Cancer Patients, The Scientific World Journal, 2012. See in PBN
• Przemysław Biecek , Ewa Szczurek , Jerzy Tiuryn , Martin Vingron, The R Package bgmm: Mixture Modeling with Uncertain Knowledge, Journal of Statistical Software, 2012. See in PBN

2011

• Przemysław Biecek , Analiza danych w programie R, Modele z efektami stałymi, losowymi i mieszanymi, 2011. See in PBN
• Przemysław Biecek , Norbert Dojer , Jerzy Tiuryn , Bi-Billboard: Symmetrization and Careful Choice of Informant Species Results in Higher Accuracy of Regulatory Element Prediction, Journal of Computational Biology, 2011. See in PBN
• Przemysław Biecek , Irit Gat-Viks, Florian Markowetz, Ewa Szczurek , Jerzy Tiuryn , Martin Vingron, Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation data, BMC Bioinformatics, 2011. See in PBN
• Przemysław Biecek , Iwona Gisterek, Agnieszka Halon, Jan Kornafel, Ewelina Lata, Rafał Matkowski, Jolanta Szelachowska, Prognostic role of c-met expression in breast cancer patients, Reports of Practical Oncology and Radiotherapy, 2011. See in PBN
• Przemysław Biecek , Przewodnik po pakiecie R, 2011. See in PBN
• Przemysław Biecek , Jan Fronk, Maciej Jończyk, Paweł Siedlecki, Alicja Sobkowiak, Paweł Sowiński, Jerzy Tiuryn , Joanna Trzcińska-Danielewicz, Rhythmic diel pattern of gene expression in juvenile maize leaf, PLoS ONE, 2011. See in PBN
• Przemysław Biecek , Wojciech Kustrzycki, Katarzyna Malcher, Joanna Rymaszewska, Joanna Szczepańska-Gieracha, Risk factors of depressive and anxiety symptoms 8 years after coronary artery bypass grafting, European Journal of Cardio-thoracic Surgery, 2011. See in PBN

2010

• Przemysław Biecek , I. Gisterek, A. Hałoń, J. Kornafel, R. Matkowski, E. Suder, J. Szelachowska, A. Łacko, E. Łata, Correlation between hepatocyte growth factor receptor and vascular endothelial growth factor-A in breast carcinoma, Folia Histochemica et Cytobiologica, 2010. See in PBN
• Przemysław Biecek , Ewa Szczurek , Jerzy Tiuryn , Martin Vingron, Introducing Knowledge into Differential Expression Analysis, Journal of Computational Biology, 2010. See in PBN
• Przemysław Biecek , M. Klinger, W. Kopeć, M. Kusztal, J. Kuźniar, Z. Marchewka, D. Patrzałek, M. Zynek-Litwin, Plasma and urine leukocyte elastase-alpha_1 protease inhibitor complex as a marker of early and long-term kidney graft function, Nephrology Dialysis Transplantation, 2010. See in PBN

2009

• Przemysław Biecek , M. Boratyńska, K. Falkiewicz, M. Klinger, M. Magott-Procelewska, D. Patrzałek, B. Speicher-Bidzińska, 1,25 Dihydroxyvitamin D Deficiency Predicts Poorer Out-come After Renal Transplantation, Transplantation Proceedings, 2009. See in PBN
• M. Boratyńska, M. Magott-Procelewska, D. Janczak, D. Patrzałek, P. Chudoba, M. Klinger, Przemysław Biecek , Estimated Glomerular Filtration Rate Evolution Between 6 and 24 Months Predicts Long-Term Kidney Transplant Sirvival Among Patients with Inferior Graft Function, Transplantation Proceedings, 2009. See in PBN
• Przemysław Biecek , M. Boratyńska, K. Falkiewicz, M. Klinger, A. Milewicz, D. Patrzałek, S.C. Zmonarski, Evolution of Bone Disease at 2 Years After Transplantation: A Single-Center Study, Transplantation Proceedings, 2009. See in PBN
• Przemysław Biecek , M. Bobenek, I. Gisterek, A. Harlozińska-Szmyrka, J. Kornafel, A. Lacko, R. Matkowski, M. Pudelko, U. Staszek, J. Szelachowska, Serum Vascular Endothelial Growth Factors A, C and D in Human Breast Tumors, Pathology Oncology Research, 2009. See in PBN

2008

• Przemysław Biecek , Małgorzata Bogdan, Riyan Cheng, R. Doerge, Florian Frommlet, Jayanta Ghosh, Extending the Modified Bayesian Information Criterion (mBIC) to Dense Markers and Multiple Interval Mapping, Biometrics, 2008. See in PBN
• M. Kusztal, W. Kopeć, Z. Marchewka, J. Kuźniar, Małgorzata Zynek-Litwin, M. Klinger, D. Patrzałek, B. Szymańska, Przemysław Biecek , Neutrophils degranulation marker - leucocyte elastase - A1 protease inhibitor complex: a~comparative study with classic (A1M, B2M) and novel (NGAL, IL-18) kidney graft injury markers, Transplantation, 2008. See in PBN
• Stanisław Cebrat, Przemysław Biecek , Krystian Bączkowski, Joanna Kiraga, Dorota Mackiewicz, Paweł Mackiewicz, MACIEJ SOBCZYŃSKI, Optimisation of Asymmetric Mutational Pressure and Selection Pressure Around the Universal Genetic Code, 2008. See in PBN
• Przemysław Biecek , Stanisław Cebrat, Dorota Mackiewicz, Wojciech Waga, Marta Zawierta, Phase Transition in Sexual Reproduction and Biological Evolution, International Journal of Modern Physics C, 2008. See in PBN
• Przemysław Biecek , Katarzyna Bońkowska, Stanisław Cebrat, Agnieszka Laszkiewicz, Relationship between the selection pressure and the rate of mutation accumulation, BANACH CENTER PUBLICATIONS, 2008. See in PBN
• Przemysław Biecek , M. Bębenek, Iwona Gisterek, J. Kornafel, A. Laćko, R. Matkowski, M. Pudełko, P. Sedlaczek, U. Staszek, K. Szewczyk, Vascular Endothelial Growth Factor C serum levels in patients with breast cancer, Radiotherapy and Oncology, 2008. See in PBN
• Przemysław Biecek , Stanisław Cebrat, Why Y chromosome is shorter and women live longer ?, European Physical Journal B, 2008. See in PBN

2007

• Andreas Baierl, Przemysław Biecek , Małgorzata Bogdan, Andreas Futschik, Locating multiple interacting quantitative trait loci using robust model selection, Computational Statistics and Data Analysis, 2007. See in PBN

Others

• Weronika Hryniewska-Guzik, Przemysław Biecek , Jakub Bilski, Bartosz Chrostowski, Jakub Drak Sbahi, A comparative analysis of deep learning models for lung segmentation on X-ray images, Progress in Polish Artificial Intelligence Research 5. Proceedings of the 5th Polish Conference on Artifcial Intelligence (PP-RAI’2024) 18–20.04.2024, Warsaw, Poland, , p. 65-72. See in PBN
• Maciej Chrabąszcz, Przemysław Biecek , Hubert Baniecki, Piotr Korczak-Komorowski, Szymon Płotka, Aggregated Attributions for Explanatory Analysis of 3D Segmentation Models, Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision (WACV 2025), , p. 160-171. See in PBN
• Weronika Hryniewska-Guzik, Luca Longo, Przemysław Biecek , CNN-Based Explanation Ensembling for Dataset, Representation and Explanations Evaluation, Explainable Artificial Intelligence : Second World Conference, xAI 2024, Valletta, Malta, July 17–19, 2024, Proceedings, Part IV, , p. 346-368. See in PBN
• Andreas Holzinger, Anna Saranti, Christoph Molnar, Przemysław Biecek , Wojciech Samek, Explainable AI Methods - A Brief Overview, xxAI - Beyond Explainable AI : International Workshop, Held in Conjunction with ICML 2020, July 18, 2020, Vienna, Austria, Revised and Extended Papers, , p. 13-38. See in PBN
• Katarzyna Kobylińska, Tomasz Mikołajczyk, Mariusz Adamek, Tadeusz Orłowski, Przemysław Biecek , Explainable Machine Learning for Modeling of Early Postoperative Mortality in Lung Cancer, Artificial Intelligence in Medicine: Knowledge Representation and Transparent and Explainable Systems - AIME 2019 International Workshops, KR4HC/ProHealth and TEAAM, Poznan, Poland, June 26–29, 2019, Revised Selected Papers, , p. 161-174. See in PBN
• Hubert Baniecki, Bartlomiej Sobieski, Przemysław Bombiński, Patryk Szatkowski, Przemysław Biecek , Hospital Length of Stay Prediction Based on Multi-modal Data Towards Trustworthy Human-AI Collaboration in Radiomics, Artificial Intelligence in Medicine : 21st International Conference on Artificial Intelligence in Medicine, AIME 2023, Portorož, Slovenia, June 12–15, 2023, Proceedings, , p. 65-74. See in PBN
• Hubert Baniecki, Przemysław Biecek , Manipulating SHAP via Adversarial Data Perturbations (Student Abstract), Proceedings of the 36th AAAI Conference on Artificial Intelligence (AAAI 2022), , p. 12907-12908. See in PBN
• Susanne Dandl, Przemysław Biecek , Giuseppe Casalicchio, Marvin N. Wright, Model Interpretation, Applied Machine Learning Using mlr3 in R, , p. 259-282. See in PBN
• Weronika Hryniewska-Guzik, Maria Kędzierska, Przemysław Biecek , Multi-task Learning for Classification, Segmentation, Reconstruction, and Detection on Chest CT Scans, Progress in Polish Artificial Intelligence Research 4, , p. 251-257. See in PBN
• Oleksandr Davydko, Vladimir Pavlov, Przemysław Biecek , Luca Longo, SRFAMap: A Method for Mapping Integrated Gradients of a CNN Trained with Statistical Radiomic Features to Medical Image Saliency Maps, Explainable Artificial Intelligence : Second World Conference, xAI 2024, Valletta, Malta, July 17–19, 2024, Proceedings, Part IV, , p. 3-23. See in PBN
• Avigyan Bhattacharya, Tapabrata Chakrabarti, Subhadip Basu, Alistair Knott, Dino Pedreschi, Raja Chatila, Susan Leavy, David Eyers, Paul D. Teal, Przemysław Biecek , Towards a crowdsourced framework for online hate speech moderation-a case study in the Indian political scenario, Companion Publication of the 16th ACM Web Science Conference, , p. 75-84. See in PBN
• Piotr Korczak-Komorowski, Hubert Baniecki, Przemysław Biecek , Towards Evaluating Explanations of Vision Transformers for Medical Imaging, 2023 IEEE/CVF Conference on Computer Vision and Pattern Recognition workshops, , p. 3726-3732. See in PBN
• Michał Kuźba, Przemysław Biecek , What Would You Ask the Machine Learning Model? Identification of User Needs for Model Explanations Based on Human-Model Conversations, ECML PKDD 2020 Workshops, , p. 447-459. See in PBN
• Przemysław Biecek , Wyjaśnialna sztuczna inteligencja, Sztuczna inteligencja dla inżynierów. Istotne obszary i zastosowania, , p. 263-295. See in PBN