Publications

Szymon Nowakowski

2025

• Alicja Bukat, Marek Bukowicki, Michał Bykowski, Karolina Kuczkowska, Szymon Nowakowski , Anna Śliwińska, Łucja Kowalewska, GRANA: An AI–based tool for accelerating chloroplast grana nanomorphology analysis using hybrid intelligence, Plant Physiology, 198 (2) 2025, p. kiaf212: 1-16. See in PBN

2024

• Paweł Rubach, Maciej Sikora, Eva Klimentova, Dawid Uchal, Denisa Sramkova, Agata P Perlinska, Mail Lan Nguyen, Marta Korpacz, Roksana Malinowska, Szymon Nowakowski , Petr Simecek, Joanna Sułkowska, Knot or not? Identifying unknotted proteins in knotted families with sequence-based Machine Learning model, Protein Science, 33 (7) 2024, p. 1-21. See in PBN

2023

• Agata P. Perlinska, Wanda Niemyska , Bartosz Greń, Marek Bukowicki, Szymon Nowakowski , Paweł Rubach, Joanna Sułkowska, AlphaFold predicts novel human proteins with knots, Protein Science, 32 (5) 2023, p. e4631: 1-10. See in PBN
• Szymon Nowakowski , Piotr Pokarowski , Wojciech Rejchel, Agnieszka Sołtys, Improving Group Lasso for high-dimensional categorical data, Computational Science - ICCS 2023 : 23rd International Conference, Prague, Czechia, 2 July 2023 - 4 July 2023. See in PBN

2021

• Dominika Nowakowska, Katarzyna Bieńkowska, Andrzej Kokoszka, Szymon Nowakowski , Stosunek osób ze schizofrenią do renty. Kwestionariusz Opinii na Temat Renty i jego zastosowanie. Doniesienie wstępne, Psychiatria, 18 (2) 2021, p. 103-110. See in PBN
• Szymon Nowakowski , UNIQUENESS OF A MEDIAN OF A BINOMIAL DISTRIBUTION WITH RATIONAL PROBABILITY, Advances in Mathematics: Scientific Journal, 10 (4) 2021, p. 1951-1958. See in PBN

2007

• Szymon Nowakowski , Jerzy Tiuryn, A new approach to the assessment of the quality of predictions of transcription factor binding sites, Journal of Biomedical Informatics, 40 (2) 2007, p. 139-149. See in PBN
• Michał Drabikowski, Jerzy Tiuryn , Szymon Nowakowski , Library of Local Descriptors Models the Core of Proteins Accurately, Proteins: Structure, Function and Genetics, 2007. See in PBN

Others

• Szymon Nowakowski , Michał Drabikowski, Efficient Local Protein Structure Prediction, , p. 308-315. See in PBN
• Szymon Nowakowski , Krzysztof Fidelis, Jerzy Tiuryn, Introducing Dependencies into Alignment Analysis and Its Use for Local Structure Prediction in Proteins, , p. 1106-1113. See in PBN