Publikacje

Krzysztof Gogolewski

Liczba publikacji: 16

2023

• Barbara Poszewiecka, Krzysztof Gogolewski , Justyna A. Karolak, Paweł Stankiewicz, Anna Gambin , PhaseDancer: a novel targeted assembler of segmental duplications unravels the complexity of the human chromosome 2 fusion going from 48 to 46 chromosomes in hominin evolution, GENOME BIOLOGY, 24 (1) 2023. Zobacz w PBN
• Katharine Sherratt, Hugo Gruson, Rok Grah, Helen Johnson, Rene Niehus, Bastian Prasse, Frank Sandmann, Jannik Deuschel, Daniel Wolffram, Sam Abbott, Alexander Ullrich, Graham Gibson, Evan L. Ray, Nicholas G. Reich, Daniel Sheldon, Yijin Wang, Nutcha Wattanachit, Lijing Wang, Jan Trnka, Guillaume Obozinski, Tao Sun, Dorina Thanou, Loic Pottier, Ekaterina Krymova, Jan H. Meinke, Maria Vittoria Barbarossa, Neele Leithäuser, Jan Mohring, Johanna Schneider, Jarosław Wlazło, Jan Fuhrmann, Berit Lange, Isti Rodiah, Prasith Baccam, Heidi Gurung, Steven Stage, Bradley Suchoski, Józef Budziński, Robert Walraven, Inmaculada Villanueva, Vit Tucek, Martin Smid, Milan Zajíček, Cesar Pérez Álvarez, Borja Reina, Nikos I. Bosse, Sophie R. Meakin, Lauren Castro, Geoffrey Fairchild, Isaac Michaud, Dave Osthus, Pierfrancesco Alaimo Di Loro, Antonello Maruotti, Veronika Eclerová, Andrea Kraus, David Kraus, Lenka Pribylova, Dimitris Bertsimas, Michael Lingzhi Li, Saksham Soni, Jonas Dehning, Sebastian Mohr, Viola Priesemann, Grzegorz Redlarski, Benjamin Bejar, Giovanni Ardenghi, Nicola Parolini, Giovanni Ziarelli, Wolfgang Bock, Stefan Heyder, Thomas Hotz, David E. Singh, Miguel Guzman-Merino, Jose L. Aznarte, David Moriña, Sergio Alonso, Enric Álvarez, Daniel López, Clara Prats, Jan Pablo Burgard, Arne Rodloff, Tom Zimmermann, Alexander Kuhlmann, Janez Zibert, Fulvia Pennoni, Fabio Divino, Marti Català, Gianfranco Lovison, Paolo Giudici, Barbara Tarantino, Francesco Bartolucci, Giovanna Jona Lasinio, Marco Mingione, Alessio Farcomeni, Ajitesh Srivastava, Pablo Montero-Manso, Aniruddha Adiga, Benjamin Hurt, Bryan Lewis, Madhav Marathe, Przemysław Porębski, Srinivasan Venkatramanan, Rafał P. Bartczuk, Filip Dreger, Anna Gambin , Krzysztof Gogolewski , Magdalena Gruziel-Słomka, Bartosz Krupa, Antoni Moszyński, Karol Niedzielewski, Jędrzej Nowosielski, Maciej Radwan, Franciszek Rakowski, Marcin Semeniuk, Ewa Szczurek , Jakub Zieliński, Jan Kisielewski, Barbara Pabjan, Yuri Kheifetz, Holger Kirsten, Markus Scholz, Przemysław Biecek , Marcin Bodych, Maciej Filiński, Radosław Idzikowski, Tyll Krueger, Tomasz Ożański, Johannes Bracher, Sebastian Funk, Predictive performance of multi-model ensemble forecasts of COVID-19 across European nations, eLife, 12 2023, s. 1-23. Zobacz w PBN

2022

• Krzysztof Gogolewski , Błażej Miasojedow , Małgorzata Sadkowska-Todys, Małgorzata Stępień, Urszula Demkow, Agnieszka Lech, Ewa Szczurek , Daniel Rabczenko, Magdalena Rosińska, Anna Gambin , Data-driven case fatality rate estimation for the primary lineage of SARS-CoV-2 in Poland, Methods, 203 2022, s. 584-593. Zobacz w PBN
• Johannes Bracher, Daniel Wolffram, Jannik Deuschel, Konstantin Görgen, Jakob L. Ketterer, Alexander Ullrich, Sam Abbott, Maria V. Barbarossa, Dimitris Bertsimas, Sangeeta Bhatia, Marcin Bodych, Nikos I. Bosse, Jan Pablo Burgard, Lauren Castro, Geoffrey Fairchild, Jochen Fiedler, Jan Fuhrmann, Sebastian Funk, Anna Gambin , Krzysztof Gogolewski , Stefan Heyder, Thomas Hotz, Yuri Kheifetz, Holger Kirsten, Tyll Krueger, Ekaterina Krymova, Neele Leithäuser, Michael L. Li, Jan H. Meinke, Błażej Miasojedow , Isaac J. Michaud, Jan Mohring, Pierre Nouvellet, Jedrzej M. Nowosielski, Tomasz Ozanski, Maciej Radwan, Franciszek Rakowski, Markus Scholz, Saksham Soni, Ajitesh Srivastava, Tilmann Gneiting, Melanie Schienle, National and subnational short-term forecasting of COVID-19 in Germany and Poland during early 2021, Communications Medicine, 2 2022, s. 136:1-17. Zobacz w PBN
• Barbara Poszewiecka, Krzysztof Gogolewski , Paweł Stankiewicz, Anna Gambin , Revised time estimation of the ancestral human chromosome 2 fusion, BMC Genomics, 23 (S6) 2022, s. 1-15. Zobacz w PBN
• Barbara Poszewiecka, Victor Murcia Pienkowski, Karol Nowosad, Jérôme D Robin, Krzysztof Gogolewski , Anna Gambin , TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure, Nucleic Acids Research, 50 (W1) 2022, s. W744-W752. Zobacz w PBN

2021

• Johannes Bracher, Daniel Wolffram, Jannik Deuschel, Konstantin Görgen, Jakob Ketterer, Alexander Ullrich, Sam Abbott, Maria Vittoria Barbarossa, Dimitris Bertsimas, Sangeeta Bhatia, MARCIN BODYCH, Nikos I. Bosse, Jan Pablo Burgard, Lauren Castro, Geoffrey Fairchild, Jan Fuhrmann, Sebastian Funk, Krzysztof Gogolewski , Quanquan Gu, Stefan Heyder, Thomas Hotz, Yuri Kheifetz, Holger Kirsten, Ekaterina Krymova, Michael Lingzhi Li, Jan H. Meinke, Isaac J. Michaud, Karol Niedzielewski, Tomasz Ożański, Franciszek Rakowski, Markus Scholz, Saksham Soni, Ajitesh Srivastava, Jakub Zieliński, Difan Zou, Tilmann Gneiting, Melanie Schienle, Hamza Tazi Bouardi, Omar Skali Lami, Łukasz Górski , Magdalena Gruziel-Słomka, Artur Kaczorek, Antoni Moszyński, Jedrzej Nowosielski, Maciej Radwan, Marcin Semeniuk, Rafał Bartczuk, Jan Kisielewski, Przemysław Biecek , VIKTOR BEZBORODOV, Dave A. Osthus, Anna Gambin , Błażej Miasojedow , Ewa Szczurek , Daniel Rabczenko, Magdalena Rosińska, Barbara Pabjan, EWARYST RAFAJŁOWICZ, EWA SKUBALSKA-RAFAJŁOWICZ, WOJCIECH RAFAJŁOWICZ, Agata Migalska, Antoine Flahault, Elisa Manetti, Christine Choirat, Benjamín Béjar Haro, Gavin Lee, Guillaume Obozinski, Tao Sun, Dorina Thanou, Pan Xu, Jinghui Chen, Lingxiao Wang, Weitong Zhang, Viktor K. Prasanna, Frost Tianjian Xu, MAREK BAWIEC, TYLL KRÜGER, A pre-registered short-term forecasting study of COVID-19 in Germany and Poland during the second wave, Nature Communications, vol. 12 (art. 5173) 2021, s. 1-16. Zobacz w PBN
• Ewa Olchowik-Grabarek, Michał Aleksander Ciach, Krzysztof Gogolewski , Natalia Dobros, Paulina Ciechowicz, Hélène Freichels, Anna Gambin , Katerina Makarova, Katarzyna Zawada, Joanna Sajkowska-Kozielewicz, Harvest time affects antioxidant capacity, total polyphenol and flavonoid content of Polish St John’s wort’s (Hypericum perforatum L.) flowers, Scientific reports, 11 (1) 2021, s. 1-12. Zobacz w PBN

2020

• Marcin Kostecki, Krzysztof Gogolewski , Anna Gambin , Low Entropy Sub-Networks Prevent the Integration of Metabolomic and Transcriptomic Data, Entropy, 22 (11) 2020, s. 1238. Zobacz w PBN

2019

• Krzysztof Gogolewski , Maciej Sykulski, Anna Gambin , Neo Christopher Chung , Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA Sequencing Data, Journal of Computational Biology, 26 (8) 2019, s. 782-793. Zobacz w PBN

2018

• Krzysztof Gogolewski , Marcin Kostecki, Anna Gambin , Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis, IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madryt, Spain, 2 grudnia 2018 - 5 grudnia 2018. Zobacz w PBN

2017

• Krzysztof Gogolewski , Weronika Wronowska, Agnieszka Lech, Bogdan Lesyng, Anna Gambin , Inferring Molecular Processes Heterogeneity from Transcriptional Data, BioMed Research International, 2017 2017, s. 6961786:1-14. Zobacz w PBN

2016

• B. L. Carofino, A. V. Dharmadhikari, M. E. Dickinson, Anna Gambin , Krzysztof Gogolewski , M. Hill, M. J. Justice, V. V. Kalinichenko, T. Majewski, R. S. Ray, Paweł Stankiewicz, J. J. Sun, P. Szafranski, V. Ustiyan, Lethal lung hypoplasia and vascular defects in mice with conditional Foxf1 overexpression, Biology Open, 2016. Zobacz w PBN

2014

• Krzysztof Gogolewski , J. Andrieux, K. Becker, F. Boidein, W. Cao, S. Cheung, B. Delobel, A. V. Dharmadhikari, B. Duban-Bedu, P. Fang, Tomasz Gambin, J. K. George-Abraham, S. Golla, E. Holinski-Feder, W. Jin, F. J. Probst, P. Stankiewicz, P. Szafranski, Anna Gambin , Molecular and clinical analyses of 16q24.1 duplications involving FOXF1 identify an evolutionarily unstable large minisatellite, BMC Medical Genetics, 15 (1) 2014, s. 128-128. Zobacz w PBN

Inne

• Anna Gambin , Krzysztof Gogolewski , PCA-like Methods for the Integration of Single Cell RNA-seq Data with Metabolic Networks, 2018 IEEE 8th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), , s. 1-1. Zobacz w PBN
• Neo Christopher Chung, Anna Gambin , Krzysztof Gogolewski , Maciej Sykulski, Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data. Zobacz w PBN