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Czasopismo: Bioinformatics

Liczba publikacji: 25

2023

Mikołaj Spytek, Mateusz Krzyziński, Sophie Hanna, Hubert Baniecki, Marvin N, Przemysław Biecek, Sophie Hanna Langbein, Marvin N Wright, Przemysław Biecek , survex: an R package for explaining machine learning survival models, Bioinformatics, 39 (12) 2023. Zobacz w PBN

Jacek Sroka , Subhadip Basu, Nirmal Das, Pawel Trzaskoma, Yana Yushkevich, Agnieszka Grabowska, Dariusz Plewczynski, Grzegorz Bokota, ADRIANA MAGALSKA, PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies, Bioinformatics, 22 (1) 2021. Zobacz w PBN

Przemysław Biecek , Rafał Cylwa, Kornel Kiełczewski, Marta Machnik, Urszula Oleksiewicz, KRAB ZNF explorer-the online tool for the exploration of the transcriptomic profiles of KRAB-ZNF factors in The Cancer Genome Atlas., Bioinformatics, 36 (3) 2020, s. 980-981. Zobacz w PBN
Neo Christopher Chung , Statistical significance of cluster membership for unsupervised evaluation of cell identities, Bioinformatics, 36 (10) 2020, s. 3107-3114. Zobacz w PBN

Aleksandra I Jarmolinska, Anna Gambin , Joanna Sułkowska, Knot_pull—python package for biopolymer smoothing and knot detection, Bioinformatics, 2019. Zobacz w PBN
Ewa Szczurek , Jerzy Tiuryn , Learning signaling networks from combinatorial perturbations by exploiting siRNA off-target effects, Bioinformatics, 35 (14) 2019, s. i605-i614. Zobacz w PBN
Aleksandra Gierut, Paweł Dąbrowski-Tumański, Wanda Niemyska , Kenneth Millett, Joanna Sułkowska, PyLink: a PyMOL plugin to identify links, Bioinformatics, 35 (17) 2019, s. 3166–3168. Zobacz w PBN

Aleksandra Gierut, Wanda Niemyska , Paweł Dąbrowski-Tumański, Piotr Sułkowski, Joanna Sułkowska, PyLasso: a PyMOL plugin to identify lassos, Bioinformatics, 33 (23) 2017, s. 3819–3821. Zobacz w PBN

Niko Beerenwinkel, Ewa Szczurek , Linear effects models of signaling pathways from combinatorial perturbation data., Bioinformatics, 2016. Zobacz w PBN
Aleksander Jankowski , Jerzy Tiuryn , Shyam Prabhakar, Romulus: robust multi-state identification of transcription factor binding sites from DNase-seq data, Bioinformatics, 32 (16) 2016, s. 2419–2426. Zobacz w PBN

Piotr Pokarowski , Renata Zbieć-Piekarska, Rafał Płoski, Agnieszka Sołtys, Wojciech Branicki, Magdalena Spólnicka, Piotr Gasperowicz, Piotr Stawiński, Joanna Kosińska, A cautionary note on using binary calls for analysis of DNA methylation, Bioinformatics, 2015. Zobacz w PBN
Janusz Bujnicki, Łukasz Kozłowski , Michal J. Pietal, GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function, Bioinformatics, 2015. Zobacz w PBN
Neo Christopher Chung , John D. Storey, Statistical significance of variables driving systematic variation in high-dimensional data, Bioinformatics, 31 (4) 2015, s. 545-554. Zobacz w PBN
Niko Beerenwinkel, Simona Constantinescu, Pejman Mohammadi1, Jörg Rahnenführer, Ewa Szczurek , TiMEx: a waiting time model for mutually exclusive cancer alterations, Bioinformatics, 2015. Zobacz w PBN

Navodit Misra, Ewa Szczurek , Martin Vingron, Inferring the paths of somatic evolution in cancer, Bioinformatics, 2014. Zobacz w PBN
A. Charzyńska, Anna Gambin , T. Jetka, Michał Komorowski, M. P. Stumpf, StochDecomp--Matlab package for noise decomposition in stochastic biochemical systems, Bioinformatics, 2014. Zobacz w PBN

Paweł Bednarz, Norbert Dojer , Agnieszka Podsiadlo, Bartosz Wilczyński , BNFinder2: Faster Bayesian network learning and Bayesian classification, Bioinformatics, 2013. Zobacz w PBN

Andrzej Kierzek, Łukasz Krupa, Jacek Sroka , Jerzy Tyszkiewicz , CalcTav - Integration of a Spreadsheet and Taverna Workbench, Bioinformatics, 2011. Zobacz w PBN

Tiago Antao, Jeffrey T. Chang, Brad A. Chapman, Peter J. A. Cock, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartosz Wilczyński , Michiel J. L. de Hoon, Biopython: freely available Python tools for computational molecular biology and bioinformatics., Bioinformatics, 2009. Zobacz w PBN
Norbert Dojer , Bartosz Wilczyński , BNFinder: Exact and efficient method for learning Bayesian networks, Bioinformatics, 2009. Zobacz w PBN

Anna Gambin , P. Wojtalewicz, CTX-BLAST - context sensitive version of protein BLAST, Bioinformatics, 2007. Zobacz w PBN
Paweł Górecki , Jerzy Tiuryn , Inferring phylogeny from whole genomes, Bioinformatics, 2007. Zobacz w PBN
Paweł Górecki , Jerzy Tiuryn , URec: a system for unrooted reconciliation, Bioinformatics, 2007. Zobacz w PBN

Grzegor Kaczor, Andrzej Kierzek, Jacek Sroka , Jerzy Tyszkiewicz , XQTav: an XQuery processor for Taverna environment, Bioinformatics, 2006. Zobacz w PBN