About Me

Research Directions
Computational medicine and molecular biology, machine learning for cancer research, spatial and spatiotemporal modeling of cellular processes, and integrative analysis of -omics data.

Current Work

  • Principal Investigator of the SONATA project funded by the National Science Centre (NCN), focusing on computational methods for modeling tumor immune infiltration in spatial imaging data.
  • Co-supervising a PhD student within the SPACETIME consortium, in collaboration with Ewa Szczurek Lab, developing novel models for spatiotemporal multimodal data.
  • Actively involved in the IMMUcan consortium, with dedicated Postdoctoral funding awarded by the consortium to support my research on spatial immune cell infiltration patterns — hosted at the University of Warsaw as part of the IMMUcan initiative.
  • Collaboration with Maciej Dobrzyński (Pertz Lab, University of Bern) on modeling ERK and AKT signaling dynamics from live-cell imaging data.
  • Evolutionary origins of the human chromosome 2 fusion event in collaboration with Anna Gambin and Pawel Stankiewicz Labs — see our recent article in Genome Biology.

News

Jun 29, 2025: I had the pleasure of presenting at the Genomics Preprint Club — a vibrant forum where researchers discuss cutting-edge advances in genomics through openly shared preprints. Grateful for the engaging questions and stimulating discussion!
Feb 24, 2025: Congratulations to my Master's student, Stanisław Janik, on the successful defense of his thesis on the detection and classification of renal glomeruli. A well-executed project at the intersection of computational pathology and medical image analysis!
Sep 14, 2024: It's been an amazing week at Ascona Workshop: Spatial and temporal statistical modeling in molecular biology. Hopefully some new collaborations will emerge soon!
May 23, 2024: My proposal Computational methods for understanding tumor immune microenvironment from spatial imaging data was selected for funding in the SONATA 19 call by National Science Centre Poland!
Apr 11, 2024: Networking and presenting poster at Munich Health Foundation Model Syposium by Helmholtz Munich -- seems like Foundation Models may be leading solutions in biomed research soon.