Wydział Matematyki, Informatyki i Mechaniki Uniwersytetu Warszawskiego
Publikacje
Bartosz Wilczyński
2018
- Agnieszka Kikulska, Tobias Rausch, Ewa Krzywinska, Magdalena Pawlak, Bartosz Wilczyński, Vladimir Benes, Piotr Rutkowski i Tomasz Wilanowski, Coordinated expression and genetic polymorphisms in Grainyhead-like genes in human non-melanoma skin cancers, Bmc Cancer 18 (1) 2018, s. 23.zobacz w PBN
- Alina Frolova i Bartosz Wilczyński, Distributed Bayesian networks reconstruction on the whole genome scale, Peerj 6 2018, s. e5692.zobacz w PBN
- I De Toma, Ilona Grabowicz, M Fructuoso, D Trujillano, Bartosz Wilczyński i M Dierssen, Overweighed mice show coordinated homeostatic and hedonic transcriptional response across brain, Eneuro 2018, s. ENEURO–0287.zobacz w PBN
2017
- Rafał Archacki, Ruslan Yatusevich, Daniel Buszewicz, Katarzyna Krzyczmonik, Jacek Patryn, Roksana Iwanicka-Nowicka, Przemysław Biecek, Bartek Wilczyński, Marta Koblowska, Andrzej Jerzmanowski i Szymon Świeżewski, Arabidopsis SWI/SNF chromatin remodeling complex binds both promoters and terminators to regulate gene expression., Nucleic Acids Research 45 (7) 2017, s. 3116–3129.zobacz w PBN
- Julia Danuta Herman-Iżycka, Michal Wlasnowolski i Bartosz Wilczyński, Taking promoters out of enhancers in sequence based predictions of tissue-specific mammalian enhancers, Bmc Medical Genomics 10 (1) 2017, s. 34.zobacz w PBN
- Magdalena Pawlak, Agnieszka Kikulska, Tomasz Wrzesinski, Tobias Rausch, Zbigniew Kwias, Bartosz Wilczyński, Vladimir Benes, Joanna Wesoły i Tomasz Wilanowski, Potential protective role of Grainyhead-like genes in the development of clear cell renal cell carcinoma, Molecular Carcinogenesis 56 (11) 2017, s. 2414–2423.zobacz w PBN
- Henri Niskanen, Irina Tuszyńska, Rafał Zaborowski, Merja Heinäniemi, Seppo Ylä-Herttuala, Bartosz Wilczyński i Minna U Kaikkonen, Endothelial cell differentiation is encompassed by changes in long range interactions between inactive chromatin regions, Nucleic Acids Research 2017.zobacz w PBN
2015
- MICHAŁ DĄBROWSKI, Norbert Dojer, Izabella Krystkowiak, Bożena Kamińska i Bartosz Wilczyński, Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data, Bmc Bioinformatics 16 2015, s. art.nr140.zobacz w PBN
- Yiliang Wei, Shamba S. Mondal, Rima Mouawad, Bartek Wilczyński, R. William Henry i David N. Arnosti, Genome-Wide Analysis of Drosophila RBf2 Protein Highlights the Diversity of RB Family Targets and Possible Role in Regulation of Ribosome Biosynthesis, G3-genes Genomes Genetics 5 (7) 2015, s. 1503–1515.zobacz w PBN
- Kinga Rutowicz, Marcin Puzio, Joanna Halibart-Puzio, Maciej Lirski, Maciej Kotliński, Magdalena Kroteń, Łukasz Kniżewski, Bartosz Lange, Anna Muszewska, Katarzyna Śniegowska-Świerk, Janusz Kościelak, Roksana Iwanicka-Nowicka, Krisztian Buza, Franciszek Janowiak, Katarzyna Żmuda, Jõesaar Indrek, Katarzyna Laskowska-Kaszub, Anna Fogtman, Hannes Kollist, Piotr Zielenkiewicz, Jerzy Tiuryn, Paweł Siedlecki, Szymon Świeżewski, Krzysztof Ginalski, Marta Koblowska, Rafał Archacki, Bartosz Wilczyński, Marcin Rapacz i Andrzej Jerzmanowski, A Specialized Histone H1 Variant Is Required for Adaptive Responses to Complex Abiotic Stress and Related DNA Methylation in Arabidopsis., Plant Physiology 169 (3) 2015, s. 2080–2101.zobacz w PBN
- Krisztián Buza, Bartosz Wilczyński i Norbert Dojer, RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes, International Journal Of Genomics 2015 (2015) 2015, s. 1–10.zobacz w PBN
2013
- Agnieszka Podsiadlo, Mariusz Wrzesień, Wiesław Paja, Witold Rudnicki i Bartosz Wilczyński, Active enhancer positions can be accurately predicted from chromatin marks and collective sequence motif data, Bmc Systems Biology 7 (Supplement 6) 2013, s. 1–7.zobacz w PBN
- Norbert Dojer, Paweł Bednarz, Agnieszka Podsiadlo i Bartosz Wilczyński, BNFinder2: Faster Bayesian network learning and Bayesian classification, Bioinformatics 29 (16) 2013, s. 2068–2070.zobacz w PBN
2012
- Bartosz Wilczyński, Ya-Hsin Liu, Zhen-Xuan Yeo i Eileen EM Furlong, Predicting Spatial and Temporal Gene Expression Using an Integrative Model of Transcription Factor Occupancy and Chromatin State, Plos Computational Biology 8 (12) 2012, s. e1002798.zobacz w PBN
- Stefan Bonn, Robert P Zinzen, Charles Girardot, E Hilary Gustafson, Alexis Perez-Gonzalez, Nicolas Delhomme, Yad Ghavi-Helm, Bartek Wilczynski, Andrew Riddell i Eileen E M Furlong, Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development, Nature Genetics 44 (2) 2012, s. 148–156.zobacz w PBN
- Paweł Bednarz i Bartosz Wilczyński, Modeling Cell Populations in Development using Individual Stochastic Regulatory Networks, w: SIMULTECH, 2012.zobacz w PBN
2009
- Bartosz Wilczyński i Norbert Dojer, BNFinder: Exact and efficient method for learning Bayesian networks, Bioinformatics 25 (2) 2009, s. 286–287.zobacz w PBN
- Bartosz Wilczyński, Norbert Dojer, Mateusz Patelak i Jerzy Tiuryn, Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs, Bmc Bioinformatics 10 2009, s. 82.zobacz w PBN
- Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartosz Wilczyński i Michiel J. L. de Hoon, Biopython: freely available Python tools for computational molecular biology and bioinformatics., Bioinformatics 25 (11) 2009, s. 1422–1423.zobacz w PBN
- Bartosz Wilczyński i Eileen Furlong, Challenges for modeling global gene regulatory networks during development: Insights from Drosophila, Developmental Biology 10 (2) 2009, s. 32.zobacz w PBN
2006
- Norbert Dojer, Anna Gambin, A. Mizera, Bartosz Wilczyński i Jerzy Tiuryn, Applying Dynamic Bayesian Networks to Perturbed Gene Expression Data, Bmc Bioinformatics 7 2006, s. 249.zobacz w PBN
- Bartek Wilczyński i Jerzy Tiuryn, Regulatory Network Reconstruction using Stochastic Logical Networks, Lecture Notes In Computer Science 4210 2006, s. 142–154.zobacz w PBN
- Katarzyna Bozek, Anna Gambin, Bartosz Wilczyński i Jerzy Tiuryn, Automated modelling of genetic control in Arabidopsis thaliana, Journal Of Fruit And Ornamental Plant Research 14 2006.zobacz w PBN
- Bartek Wilczyński, Tr. Hvidsten, A. Kryshtafovych, Jerzy Tiuryn, J. Komorowski i K. Fidelis, Using local gene expression similarities to discover regulatory binding site modules, Bmc Bioinformatics 7 2006, s. 505.zobacz w PBN
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