Marek Biskup - Homepage

dr Marek Biskup

Faculty of Mathematics, Informatics and Mechanics,
University of Warsaw
MIM UW
ul. Banacha 2
02-097 Warsaw
Poland

room: none
office phone: none
email: marek.biskup (at) mimuw o edu o pl

Teaching

2011-2012
- Teoria informacji - wyklad
2010-2011
- Teoria sterowania w systemach komputerowych - wyklad monograficzny
- Zespolowy projekt programistyczny - proseminarium
2007-2008
- Technologia informacyjna - wykład studentow ISNS
- Algorytmy sekwencyjne II - wykład dla MSUI
- Języki, Automaty, Obliczenia - ćwiczenia
2006-2007
- Metody realizacji języków programowania - ćwiczenia
- Metody realizacji języków programowania - laboratorium
2005-2006
- Metody realizacji języków programowania - ćwiczenia
- Metody realizacji języków programowania - laboratorium

Publications

I. Antcheva, M. Ballintijn, B. Bellenot, M. Biskup, R. Brun, N. Buncic, Ph. Canal, D. Casadei, O. Couet, V. Fine, L. Franco, G. Ganis, A. Gheata, D. Gonzalez Maline, M. Goto, J. Iwaszkiewicz, A. Kreshuk, D. Marcos Segura, R. Maunder, L. Moneta, A. Naumann, E. Offermann, V. Onuchin, S. Panacek, F. Rademakers, P. Russo, M. Tadel, ROOT - A C++ framework for petabyte data storage, statistical analysis and visualization; Computer Physics Communications, Volume 180, Issue 12, December 2009, Pages 2499-2512
Marek Tomasz Biskup, Wojciech Plandowski, Guaranteed Synchronization of Huffman Codes with Known Position of Decoder; Proceedings of the 18-th IEEE Data Compression Conference (DCC'09), Snowbird, Utah, March 2009.
Marek Tomasz Biskup, Shortest Synchronizing Strings for Huffman Codes, In Edward Ochmanski and Jerzy Tyszkiewicz, editors, MFCS, volume 5162 of Lecture Notes in Computer Science, pages 120-131. Springer, 2008.
Marek Biskup, Parallel software applications in high-energy physics, Proceedings of the Inverted CERN School of Computing 2005 and 2006 editions, editor: L. Teodorescu, CERN, Genva, 7 March 2008.
Marek Tomasz Biskup, A Word That Does Not Appear in Encoded Message as a Resynchronization Marker; Proceedings of the IEEE Information Theory Workshop (ITW 2008), Porto, Portugal, May 2008.
A. Majczyna, M. Nalezyty, M. Biskup, G. Wrochna, M. Sokolowski, K. Nawrocki, K. Malek, L. Mankiewicz and L.W. Piotrowski, The catalog of short periods stars from the "Pi of the Sky" data, New Astronomy 13 (2008) 414-417.
Marek Tomasz Biskup, Guaranteed Synchronization of Huffman Codes; Proceedings of the 18-th IEEE Data Compression Conference (DCC'08), Snowbird, Utah, March 2008.
Marek Biskup, Katarzyna Malek, Lech Mankiewicz, Marcin Sokolowski, and Grzegorz Wrochna, Web interface for star databases of the Pi of the Sky experiment Proc. SPIE 6937, 693706 (2007)
A. Majczyna, M. Nalezyty, M. Biskup, M. Sokolowski, K. Nawrocki, G. Wrochna, and L. Mankiewicz, Period and variability type determination for the stars in the Pi of the Sky data Proc. SPIE 6937, 693704 (2007)
M. Biskup, K. Malek, L. Mankiewicz, L. W. Piotrowski, M. Sokolowski, G. Wrochna, and A. F. Zarnecki, Providing on-line access to the Pi of the Sky data Proc. SPIE 6937, 693705 (2007).
Y.E.M. van der Burgt, I.M. Taban, M. Konijnenburg, M. Biskup, M.C. Duursma, R.M.A. Heeren, A. Römpp, R.V. van Nieuwpoort and H.E. Bal Parallel Processing of Large Datasets from NanoLC-FTICR-MS Measurements Journal of the American Society for Mass Spectrometry, Volume 18, Issue 1, January 2007, Pages 152-161.
Maarten Ballintijn, Marek Biskup, René Brun, Philippe Canal, Derek Feichtinger, Gerardo Ganis, Günter Kickinger, Andreas Peters and Fons Rademakers, Parallel interactive data analysis with PROOF, Nuclear Instruments and Methods in Physics Research A 559 (2006) 13-16.
M. Biskup, M. Cwiok, H. Czyrkowski, R. Dabrowski, W. Dominik, G. Kasprowicz, K. Malek, L. Mankiewicz, M. Molak, J. Mrowca - Ciulacz, K. Nawrocki, L.W. Piotrowski, P. Sitek, M. Sokolowski, J. Uzycki, G. Wrochna, A.F. Zarnecki, Study of rapidly varying astrophysical objects with the "Pi of the Sky" apparatus, Proceedings of SPIE Volume: 6347, 63470L, Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2006.
M. Biskup, L. Mankiewicz, M. Sokolowski, G. Wrochna, Databases for the "Pi of the Sky" experiment, Proceedings of SPIE Volume: 6347, 63470L, Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2006.
K.Kwiecinska, M.Biskup, K.Malek, L.Mankiewicz, B.Pilecki, M.Sokolowski, D.Szczygiel, G.Wrochna, Variable stars study in "Pi of the Sky" project, Proc. SPIE Vol. 6159, 61590O, Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments IV.

Presentations

Guaranteed Synchronization of Huffman Codes with Known Start Position of Decoder Data Compression Conference, Snowbird, Utah, 2009-03-16
Guaranteed Synchronization of Huffman Codes Data Compression Conference, Snowbird, Utah, 2008-03-27
Informatyka w "Pi of the Sky" (in Polish, English title: Computer Science in the "Pi of the Sky"), Computer Science seminar at Faculty of Mathematics and Natural Sciences, College of Sciences, Cardinal Stefan Wyszynski University, Warsaw, 2007-10-25
Informatyka w "Pi of the Sky" (in Polish, English title: Computer Science in the "Pi of the Sky"), Digital Signal Processing seminar at the Faculty of Mathematics, Informatics and Mechnics, University of Warsaw, Warsaw, 2007-10-24
Bazy danych "Pi of the Sky" (in Polish, English title: Databases of "Pi of the Sky"), Databases 2 seminar at the Faculty of Mathematics, Informatics and Mechnics, University of Warsaw, Warsaw, 2007-10-11
Synchronization of Huffman Codes, students' session during lectures for Ph.D. students at the University of Warsaw, Warsaw, 2007-05-26
Web interface for Star Databases of the "Pi of the Sky" Experiment, XXth IEEE-SPIE Joint Symposium on Photonics, Web Engineering, Electronics for Astronomy and High Energy Physics Experiments, Wilga, Poland, 2007-05-24
Databases for the Pi of the Sky Experiment, XVIIIth IEEE-SPIE Joint Symposium on Photonics and Web Engineering Electronics for Astronomy and High Energy Physics Experiments, Wilga, Poland, 2006-06-03
Zastosowania spektrometrii mas w identyfikacji białek (in Polish, English title: Mass Spectrometry Application for Protein identification), High Energy Physics Students' Seminar, Warsaw, 2006-04-10
Parallel Computing, CERN Inverted School of Computing, CERN, Genewa, Switzerland, 2006-03-07
Synchronizing Threads and Processes CERN Inverted School of Computing, CERN, Genewa, Switzerland, 2006-03-07
Design Patterns for Concurrent Objects CERN Inverted School of Computing, CERN, Genewa, Switzerland, 2006-03-07
Parallel Computing with ROOT and PROOF (together with Yushu Yao), CERN Inverted School of Computing, CERN, Genewa, Switzerland, 2006-03-07
Eksperyment "Pi of the Sky" - algorytmy wyznaczania okresu gwiazd zmiennych (in Polish, English title: The Pi of the Sky Experiment - algorithms for variable stars' phasing), High Energy Physics Students' Seminar, Warsaw, 2006-01-23
Projekt ILC: międzynarodowy akcelerator liniowy (in Polish, English traslation: ILC project: International Linear Colider), High Energy Physics Students' Seminar, Warsaw, 2005-11-28
The PROOF GUI & API/Selectors, ROOT Workshop 2005, CERN, Genewa, Switzerland, 2005-09-29
Parallel interactive and batch HEP data analysis with PROOF, X International Workshop on Advanced Computing and Analysis Techniques in Physics Research, ACAT 2005, DESY, Zeuthen, Germany
Linux 2.4.7 - Pamięć - Zarządzanie wolnymi ramkami (in Polish, English title: Linux 2.4.7 - Memory - Free Frames Management), Operating Systems classes at the University of Warsaw, Warsaw, 2001

Others

Error Resilience in Compressed Data - Selected Topics, Ph.D. dissertation (Computer Science), University of Warsaw, September 2008.
Notatki do wykładu "Metody realizacji języków programowania" (in Polish, English title: Compiler Construction - Lecture Notes), together with Marcin Benke, Paweł Górecki, Marcin Kowalczyk, Andrzej Salwicki (project coordinator), Łukasz Sznuk, Marek Warpechowski, Artur Zaroda; Warsaw, 2006
The chapters:
- Static semantic analysis
- Practical work
Poszukiwanie gwiazd zmiennych w eksperymencie Pi of the Sky (in Polish, English title: Variable stars search in the "Pi of the Sky" experiment), M.Sc. Thesis (Physics), University of Warsaw, May 2007
Star catalogue browser for the Pi of the Sky experiment
Automated Protein Identification in HR FT-ICR MS in a Distributed Environment, M.Sc. Thesis (Computer Science), University of Warsaw, Warsaw, Poland and Vrije Universiteit, Amsterdam, The Netherlands; July 2004
Liczby losowe (in Polish, English title: Random number generators), Algorithmic Aspects of Cryptography classes, University of Warsaw, Warsaw, 2002

Former activities

Pi of the Sky experiment member
Live* project, Sun Microsystems Laboratories, Menlo Park, California
ROOT project, PROOF subproject, CERN, Genewa, Switzerland
VL-e project, Institute for Atomic and Molecular Physics, Amsterdam, The Netherlands