This is a supplementary page for the article "CTX-BLAST: context sensitive version of protein BLAST" (submitted to Bioinformatics).
We provide here materials and supplementary experimental results that were not included in the article.

• BLAST and CTX-BLAST alignments for 1100 pairs of remote protein homologues selected from PFAM and COG databases: (file bio.zip)
  
• The insulin example (PFAM family PF00049)
  
• The spike glycoprotein example (PFAM family PF00974)

• Experiments with artificial bait seqences (alignment)
• Homologues for one bait sequence
  
• E-value vs % of sequence identity plot
• The examples of context sensitive proteins (function determined by Gene Ontology)

• The estimation of EVD parameters